Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC096741.1-201ENST00000472250 846 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXN3O00409 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 AC021193.1-201ENST00000511607 420 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AL671862.1-201ENST00000515851 349 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.85□□□□□ -1.47
FOXN3O00409 AC091163.3-201ENST00000518269 1144 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 NPM1P35-201ENST00000533043 868 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC008083.2-201ENST00000546707 476 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AL049872.1-201ENST00000556323 322 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 MTCYBP23-201ENST00000558717 1102 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC010547.6-201ENST00000571789 193 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.85□□□□□ -1.47
FOXN3O00409 MIR4505-201ENST00000582238 73 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 MIR548Y-201ENST00000582739 110 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC006272.2-201ENST00000594725 163 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC012616.1-201ENST00000600294 197 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC093673.2-201ENST00000609674 331 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AL157392.4-201ENST00000609756 345 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 AC132068.1-201ENST00000623805 459 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC008993.2-201ENST00000631744 806 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 AP001029.2-203ENST00000589795 4910 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
FOXN3O00409 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXN3O00409 AL360270.2-201ENST00000562952 5985 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXN3O00409 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
FOXN3O00409 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 RNA5SP122-201ENST00000384457 108 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.84□□□□□ -1.47
FOXN3O00409 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 OR2AT2P-201ENST00000413438 905 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 VTA1P1-201ENST00000414044 866 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 KCTD9P1-201ENST00000430462 1167 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 RRM2P4-201ENST00000441721 562 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AL591623.2-201ENST00000449978 222 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 NPM1P19-201ENST00000450070 712 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AL591363.1-201ENST00000450091 483 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXN3O00409 RPS12P31-201ENST00000491419 398 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 IGBP1P4-201ENST00000503202 879 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC109464.1-201ENST00000511091 819 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC074087.1-201ENST00000512059 724 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 NRBF2P4-201ENST00000520874 850 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AP001372.4-201ENST00000524889 472 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.84□□□□□ -1.47
FOXN3O00409 AP004609.2-201ENST00000532177 190 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 OR4A43P-201ENST00000532938 908 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXN3O00409 ZNF971P-201ENST00000562068 1249 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC022884.3-201ENST00000579571 248 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 AC006363.1-201ENST00000603806 463 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC073387.2-201ENST00000604797 784 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC011374.2-201ENST00000607135 526 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXN3O00409 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXN3O00409 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.84□□□□□ -1.47
FOXN3O00409 STX3-208ENST00000641815 3236 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXN3O00409 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXN3O00409 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXN3O00409 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.84□□□□□ -1.47
FOXN3O00409 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXN3O00409 AP005435.3-201ENST00000531260 3198 ntBASIC5.83□□□□□ -1.48
FOXN3O00409 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXN3O00409 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms