Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC097504.1-201ENST00000515103 2415 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 MGP-201ENST00000228938 694 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RNA5SP322-201ENST00000363617 119 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SKP113-201ENST00000363891 295 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 SNORA66-201ENST00000384792 133 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AL096711.1-201ENST00000404780 554 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RNU4-34P-201ENST00000410431 124 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 NENFP1-201ENST00000419476 466 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 E2F6P1-201ENST00000428850 745 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 HLA-N-201ENST00000437516 135 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 BMS1P11-201ENST00000442351 885 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AL445665.1-202ENST00000452436 324 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 HMGN2P7-201ENST00000456186 273 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 BMS1P9-201ENST00000457640 885 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7L1P8-201ENST00000469911 741 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 OARD1-211ENST00000480585 829 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL29P23-201ENST00000486188 442 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL5P33-201ENST00000487833 905 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC005412.2-201ENST00000492004 341 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7P47-201ENST00000497299 556 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 PARP4P3-201ENST00000510265 317 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AP003396.4-201ENST00000527574 265 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 OR4C2P-201ENST00000530855 1064 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC068408.1-201ENST00000577406 1144 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 MIR4732-201ENST00000581873 76 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC123786.2-201ENST00000603459 275 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 IGKV1OR2-9-201ENST00000603957 287 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 IGKV1OR2-11-201ENST00000604120 287 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AL499605.1-201ENST00000604628 403 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008966.2-201ENST00000606157 453 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AL031666.3-201ENST00000609320 1006 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 OSTC-205ENST00000613215 876 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 OR5AC4P-202ENST00000642086 985 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 TNPO1P3-201ENST00000436471 2662 ntBASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 FGG-201ENST00000336098 1659 ntTSL 2 BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHKB-CPT1BH3BT56 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 RNU6-603P-201ENST00000411403 107 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL35AP3-201ENST00000414680 288 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 CENPIP1-201ENST00000425713 902 ntBASIC2.59□□□□□ -1.99
CHKB-CPT1BH3BT56 AL138785.1-201ENST00000425821 331 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms