Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 TMSB4XP4-201ENST00000323496 618 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 RNU5B-4P-201ENST00000363508 111 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 SNORD56.4-201ENST00000363883 71 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 RNA5SP223-201ENST00000365174 120 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 MIR105-1-201ENST00000385222 81 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 U3.23-201ENST00000391132 200 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 ARF4P4-201ENST00000439608 520 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 MTCYBP12-201ENST00000440559 1134 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 CALM1P2-201ENST00000452941 448 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 YWHAEP1-201ENST00000453697 763 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC069277.2-201ENST00000454211 432 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC100832.1-201ENST00000471945 383 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 CLIC4P2-201ENST00000601934 717 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC104695.2-201ENST00000605056 775 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AL359513.1-201ENST00000614364 557 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC073869.10-201ENST00000642016 354 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC100778.3-201ENST00000580060 1750 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 HSPD1P11-201ENST00000508643 1702 ntBASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
TCRBV7S3A2A0A539 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AL022311.1-201ENST00000623726 19416 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 MT-TP-201ENST00000387461 68 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 RNU6-298P-201ENST00000390888 96 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 RNA5SP339-201ENST00000390987 122 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 SNORA79B-201ENST00000410557 148 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 RNU2-18P-201ENST00000411224 162 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AL390774.1-201ENST00000411924 246 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AL445183.3-201ENST00000414168 502 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC008173.1-201ENST00000418901 264 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 NAP1L4P2-201ENST00000425958 899 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC093716.1-201ENST00000435923 377 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 GAPDHP58-201ENST00000438477 1006 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 CYCSP42-201ENST00000450823 238 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 EIF1P7-201ENST00000487533 337 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 BTG4P1-201ENST00000510421 183 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SKP70-201ENST00000516655 271 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 HMGB1P40-201ENST00000525121 540 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC027544.3-201ENST00000535082 757 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 LSM3P2-201ENST00000551246 273 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC010735.1-201ENST00000567305 1026 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 MIR4509-3-201ENST00000578671 94 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AP000919.1-202ENST00000581139 1264 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 MIR4509-2-201ENST00000583920 94 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 SUGT1P3-202ENST00000604259 383 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC112220.2-201ENST00000605513 533 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC025175.1-201ENST00000606482 759 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 FAM72A-208ENST00000607379 1139 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 MIR4509-1-201ENST00000618224 94 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC118658.2-201ENST00000618697 459 ntBASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.3□□□□□ -1.56
TCRBV7S3A2A0A539 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms