Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GTF2IP7-202ENST00000436677 309 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 CBX1P4-201ENST00000439415 457 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC234781.3-201ENST00000452540 973 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 HMGB1P4-201ENST00000455362 567 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 VPS25P1-201ENST00000455691 508 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC008945.1-201ENST00000505144 499 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC018442.3-201ENST00000523025 183 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC090751.1-201ENST00000566966 267 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 BPTFP1-201ENST00000579209 492 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC008088.1-201ENST00000580993 280 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC009237.12-201ENST00000604755 742 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 MIR6793-201ENST00000612376 63 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC022509.4-201ENST00000621404 572 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC017037.3-201ENST00000625016 472 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC011416.1-201ENST00000514947 1732 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AP005432.1-201ENST00000580891 3485 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 AC106872.5-201ENST00000508856 1416 ntBASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA6Q9Y5G7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RNU6-560P-201ENST00000364007 108 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 MIR16-1-201ENST00000385271 89 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL132875.1-201ENST00000403623 949 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RPS7P8-201ENST00000418311 581 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL009174.1-201ENST00000426577 416 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC016027.5-201ENST00000427227 210 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC073069.1-201ENST00000428657 441 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 MOB1AP1-201ENST00000430903 535 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 HMGB1P45-201ENST00000435986 653 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AP000936.3-201ENST00000438127 255 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 VN1R110P-201ENST00000438988 971 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 ATG12P2-201ENST00000456830 416 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RANP2-201ENST00000456833 229 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC026348.1-201ENST00000462549 1053 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC011979.1-201ENST00000472300 483 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RN7SL174P-201ENST00000475578 289 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RN7SL273P-201ENST00000481561 299 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC091951.3-201ENST00000504093 246 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 FABP5P12-201ENST00000515543 389 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 RNA5SP438-201ENST00000516561 112 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 Y_RNA.710-201ENST00000516975 110 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AP003461.1-201ENST00000528866 78 ntBASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA6Q9Y5G7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms