Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC092376.2-201ENST00000622621 4116 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 AC108751.5-201ENST00000492880 1336 ntBASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 AC025574.1-201ENST00000554784 1653 ntBASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SHANK2Q9UPX8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 U3.35-201ENST00000408405 208 ntBASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 RPL36AP36-201ENST00000418616 301 ntBASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 CR383656.1-201ENST00000484916 377 ntBASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 AL049830.4-201ENST00000555149 351 ntBASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 AC068831.4-201ENST00000556118 109 ntBASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SHANK2Q9UPX8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 RN7SKP267-201ENST00000410381 285 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 AC021660.1-201ENST00000465006 554 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 RPL5P12-201ENST00000477071 851 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 AC109635.6-201ENST00000525487 1113 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 SNORA74C-1-201ENST00000580726 201 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 AL121890.3-201ENST00000618494 516 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 NOL8P1-201ENST00000508336 3529 ntBASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHANK2Q9UPX8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 AL445189.1-201ENST00000405722 338 ntBASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 AC011276.1-201ENST00000469688 323 ntBASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 AC004817.4-201ENST00000602396 3625 ntBASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 AC239868.2-201ENST00000564237 4527 ntBASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 CASC19-255ENST00000641733 1385 ntBASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SHANK2Q9UPX8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 RPL7P58-201ENST00000402913 758 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC079809.1-201ENST00000415468 276 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 UQCRBP1-201ENST00000421129 336 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC073073.1-201ENST00000493920 463 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 NIFKP7-201ENST00000503365 834 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 MTCO1P35-201ENST00000515270 228 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC097486.1-201ENST00000515331 210 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AP001781.1-201ENST00000530977 207 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC093249.4-201ENST00000564755 259 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC053481.3-201ENST00000577881 843 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AL133338.2-201ENST00000604292 736 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 BX005214.3-202ENST00000619809 325 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AL121950.1-201ENST00000624993 2077 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 AC022417.1-201ENST00000624768 1303 ntBASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms