Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 HSPD1P8-201ENST00000400121 1658 ntBASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 AC012213.2-201ENST00000562917 4597 ntBASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 TMCC1P1-201ENST00000518897 1980 ntBASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 AC073365.1-203ENST00000641055 1992 ntBASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.95□□□□□ -1.3
SALL4Q9UJQ4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 RPL21P132-201ENST00000331267 462 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 Y_RNA.453-201ENST00000384223 109 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 RNU6-1263P-201ENST00000384601 106 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 MTCYBP24-201ENST00000420387 1106 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC009237.2-201ENST00000421358 284 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 FAM183DP-201ENST00000421987 399 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AKR1B10P1-201ENST00000425765 942 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC002069.1-201ENST00000429649 1159 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 MTCO2P11-201ENST00000431069 680 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 PDSS1P2-201ENST00000449397 678 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC131392.1-201ENST00000506490 633 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC138866.2-201ENST00000508650 584 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 NACAP5-201ENST00000509863 636 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 GUSBP9-201ENST00000510138 584 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 MINOS1P4-201ENST00000515470 318 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 CDC42P3-201ENST00000518493 633 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AP005639.1-201ENST00000526939 192 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 CR383656.6-201ENST00000550518 394 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 PSMB7P1-201ENST00000556349 514 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC090578.1-201ENST00000604955 591 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC009994.1-201ENST00000606889 253 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC024255.1-201ENST00000614376 102 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC010133.1-201ENST00000615809 842 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 MRPL57P1-201ENST00000621486 265 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC138649.3-201ENST00000622154 254 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 RPS4XP5-202ENST00000449995 1334 ntBASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SALL4Q9UJQ4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 RNA5SP88-201ENST00000365560 109 ntBASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SALL4Q9UJQ4 UBBP1-201ENST00000392399 473 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms