Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AL672167.1-203ENST00000641299 2975 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 MIR554-201ENST00000384874 96 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 BTF3P10-201ENST00000433415 495 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AC021193.1-201ENST00000511607 420 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 OR2L1P-202ENST00000641567 1023 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AC099654.3-201ENST00000447087 1546 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 ARL4AP4-201ENST00000434170 518 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AC104763.1-201ENST00000475274 360 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AL391684.1-202ENST00000641293 1636 ntBASIC4.81□□□□□ -1.64
CHD7Q9P2D1 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CHD7Q9P2D1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 RNA5SP124-201ENST00000362739 110 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AL451139.1-201ENST00000434718 346 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AGGF1P6-201ENST00000569213 976 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 MIR7853-201ENST00000584820 132 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AL354984.3-201ENST00000604803 325 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AC112484.5-201ENST00000624189 228 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AC032011.1-201ENST00000611703 1549 ntBASIC4.8□□□□□ -1.64
CHD7Q9P2D1 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHD7Q9P2D1 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 AC010329.1-201ENST00000593903 8328 ntBASIC4.79□□□□□ -1.64
CHD7Q9P2D1 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 H3F3BP1-201ENST00000440551 403 ntBASIC4.79□□□□□ -1.64
CHD7Q9P2D1 RPS27AP13-201ENST00000498403 237 ntBASIC4.79□□□□□ -1.64
CHD7Q9P2D1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms