Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SND1-IT1Q9HBX3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SND1-IT1Q9HBX3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SND1-IT1Q9HBX3 CASC19-221ENST00000641309 1382 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AL133268.1-201ENST00000405676 1401 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 OR52B3P-201ENST00000314715 928 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 MIR7-1-201ENST00000384871 110 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC240504.1-201ENST00000395709 845 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AP000580.1-201ENST00000404439 358 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 RNU6-564P-201ENST00000410983 104 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 RNU6-603P-201ENST00000411403 107 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 HMGN1P20-201ENST00000411849 300 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC073136.2-201ENST00000417282 849 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 TMBIM7P-201ENST00000418074 855 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 RPL34P3-201ENST00000421454 338 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 FABP7P2-201ENST00000429946 379 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC007563.3-201ENST00000433233 371 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC110602.1-201ENST00000437414 318 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 RPS11P7-201ENST00000442125 465 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 RAD1P2-201ENST00000446414 663 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC104634.1-201ENST00000452720 462 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 HMGB1P4-201ENST00000455362 567 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC108751.2-201ENST00000469993 231 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC008410.1-201ENST00000483777 339 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 UBA52P3-201ENST00000491303 382 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC005412.2-201ENST00000492004 341 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC108471.1-201ENST00000513977 287 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 ACTR6P1-201ENST00000514311 1104 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP271-201ENST00000516700 88 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 HMGB1P19-201ENST00000517578 577 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AL049830.4-201ENST00000555149 351 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 CYCSP40-201ENST00000575927 294 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 CCDC58P1-201ENST00000578567 430 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC010200.2-201ENST00000605098 235 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC090948.2-201ENST00000607363 564 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC007683.2-201ENST00000624681 714 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC119674.1-212ENST00000641155 993 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF733P-202ENST00000444809 1573 ntBASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.38□□□□□ -1.87
SND1-IT1Q9HBX3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 MAPK10-304ENST00000641341 3984 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC007382.1-201ENST00000624376 2618 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP433-201ENST00000364491 114 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms