Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 AL121890.2-201ENST00000617644 465 ntBASIC5.17□□□□□ -1.58
RPRD1AQ96P16 AF117829.2-201ENST00000619538 361 ntBASIC5.17□□□□□ -1.58
RPRD1AQ96P16 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.17□□□□□ -1.58
RPRD1AQ96P16 INTS6P1-201ENST00000504674 2530 ntBASIC5.17□□□□□ -1.58
RPRD1AQ96P16 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 RN7SKP104-201ENST00000362605 328 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 RN7SKP95-201ENST00000362860 303 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 ATP5HP3-201ENST00000396994 486 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 CHEK2P3-201ENST00000416118 248 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AF186996.5-201ENST00000418098 904 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 RPS27P18-201ENST00000431701 247 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 RAB9AP5-201ENST00000437794 597 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 PRPF38AP2-201ENST00000438179 851 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 RAB9AP2-201ENST00000443911 597 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 SUMO2P1-206ENST00000445436 284 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 HMGB1P4-201ENST00000455362 567 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC107015.1-201ENST00000466902 747 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC005000.1-201ENST00000536192 288 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AL512310.9-201ENST00000553311 948 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC040958.1-201ENST00000561102 201 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC018552.1-201ENST00000562099 811 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC115989.2-201ENST00000578640 563 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC011487.3-201ENST00000593607 453 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC005377.1-201ENST00000605126 456 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 FRG1EP-201ENST00000634469 770 ntBASIC5.16□□□□□ -1.58
RPRD1AQ96P16 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RPRD1AQ96P16 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.15□□□□□ -1.58
RPRD1AQ96P16 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 RNU6-1320P-201ENST00000390838 107 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 RNU6-1269P-201ENST00000391139 107 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AL109941.1-201ENST00000401925 229 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AL136116.2-201ENST00000404020 785 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 RN7SKP125-201ENST00000410481 302 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 NPM1P40-201ENST00000412758 733 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 VN1R31P-201ENST00000417498 730 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 VN1R54P-201ENST00000435210 1049 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AL450263.2-201ENST00000439400 589 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 RBMY2TP-201ENST00000451162 947 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 RNU6-599P-201ENST00000459383 107 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 RNU6-1193P-201ENST00000459461 107 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AGGF1P3-201ENST00000493675 1213 ntBASIC5.15□□□□□ -1.59
RPRD1AQ96P16 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RPRD1AQ96P16 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms