Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 RNA5SP433-201ENST00000364491 114 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL672167.2-201ENST00000377164 879 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 Y_RNA.489-201ENST00000384410 101 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 MRPL42P3-201ENST00000401492 326 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL390316.1-201ENST00000406279 553 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 RN7SKP91-201ENST00000410852 288 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 RPEP2-201ENST00000432149 701 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 FTH1P16-201ENST00000435241 552 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL353093.1-201ENST00000441292 436 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL136454.1-201ENST00000443181 466 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC097359.1-201ENST00000447946 463 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 UOX-201ENST00000471089 899 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC078785.3-201ENST00000476607 425 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 MTCO1P29-201ENST00000496868 288 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 RNA5SP518-201ENST00000515957 119 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AP001803.1-201ENST00000525668 147 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 APOOP3-201ENST00000536787 586 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC051619.2-201ENST00000559063 397 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL451054.1-201ENST00000621770 772 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC095038.1-201ENST00000429248 1591 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 MAPK10-354ENST00000641823 2732 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LRCH3Q96II8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 RNU6-1120P-201ENST00000362988 108 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 RNU6-619P-201ENST00000365146 108 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 Y_RNA.527-201ENST00000384573 102 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AL049697.2-201ENST00000403708 294 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 Z93019.1-201ENST00000416450 973 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 RPL7P10-201ENST00000417407 739 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 RPA2P2-201ENST00000419698 796 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC006335.2-201ENST00000437993 330 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 HMGB3P22-202ENST00000451823 572 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 RPL26P30-201ENST00000453533 435 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 Vault.3-201ENST00000516676 95 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.97□□□□□ -1.13
LRCH3Q96II8 AC105031.1-201ENST00000518550 476 ntBASIC7.97□□□□□ -1.13
LRCH3Q96II8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms