Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 EIF3KP3-201ENST00000514461 639 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 SNORD46.2-201ENST00000516021 102 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 SNORA43.3-201ENST00000517240 103 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 NPM1P6-201ENST00000521088 871 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AP002812.4-201ENST00000532139 286 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 CKS1BP1-201ENST00000555221 240 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 MTCYBP13-201ENST00000578634 1093 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 ZNF92P3-201ENST00000596594 954 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AC073137.1-201ENST00000605636 634 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AP005131.7-201ENST00000610087 611 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AC091932.2-201ENST00000623014 291 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 AC011447.7-201ENST00000624228 1590 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 OR13C1P-202ENST00000641378 2919 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC000374.1-201ENST00000434698 1745 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 BRAFP1-201ENST00000445336 2703 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 MIR551A-201ENST00000385042 96 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AL359643.1-201ENST00000404109 423 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 SDHDP6-201ENST00000414693 480 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 LINC01881-201ENST00000416103 412 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 OR6D1P-201ENST00000436165 939 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 RPL23AP19-201ENST00000436229 369 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AL035090.1-201ENST00000454835 332 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC007998.1-201ENST00000474156 672 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC109481.1-201ENST00000509173 282 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 POLR2KP1-201ENST00000553226 168 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC090515.3-201ENST00000560431 315 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC040958.1-201ENST00000561102 201 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 MIR4512-201ENST00000583257 77 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AL118556.2-201ENST00000614375 824 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 BMS1P21-201ENST00000634565 365 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
PTP4A1Q93096 Z95327.2-201ENST00000414579 1873 ntBASIC4.86□□□□□ -1.63
PTP4A1Q93096 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTP4A1Q93096 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 MAPK10-349ENST00000641767 3661 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 OR9K1P-201ENST00000326513 941 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTP4A1Q93096 GAPDHP42-201ENST00000406848 981 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AP000357.1-201ENST00000409926 1165 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 RNU2-17P-201ENST00000410290 190 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC093155.2-201ENST00000420734 937 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 FAR1P1-201ENST00000427163 934 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.85□□□□□ -1.63
PTP4A1Q93096 AL513321.1-201ENST00000441175 761 ntBASIC4.85□□□□□ -1.63
PTP4A1Q93096 PCNPP2-201ENST00000441651 455 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms