Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.07□□□□□ -1.28
HPS1Q92902 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HPS1Q92902 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 NF1P8-201ENST00000415351 1461 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 ENO1P4-201ENST00000416471 1785 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 Y_RNA.25-201ENST00000362528 102 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HPS1Q92902 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HPS1Q92902 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.06□□□□□ -1.28
HPS1Q92902 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HPS1Q92902 RPL31P12-201ENST00000422587 358 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 GAPDHP55-201ENST00000423136 803 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HPS1Q92902 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 RPS10P2-201ENST00000430953 494 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 ERLEC1P1-201ENST00000433806 578 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC007790.1-201ENST00000439081 782 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 WDR82P1-201ENST00000439836 939 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 FUNDC2P4-201ENST00000441207 421 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 EFCAB14P1-201ENST00000442409 463 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 RPL12P25-201ENST00000455592 494 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 HSPE1P22-201ENST00000456856 327 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 RN7SL854P-201ENST00000459767 295 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 MEMO1P3-201ENST00000459811 302 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 RPL5P30-201ENST00000465511 891 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AC092324.1-201ENST00000468671 324 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 PA2G4P4-201ENST00000473864 1182 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AL031864.2-201ENST00000498507 350 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AC114964.1-201ENST00000502306 1111 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC7.06□□□□□ -1.28
HPS1Q92902 RNY3P15-201ENST00000516297 97 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.06□□□□□ -1.28
HPS1Q92902 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC7.06□□□□□ -1.28
HPS1Q92902 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC144548.1-201ENST00000549577 324 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC099489.2-201ENST00000574976 260 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS1Q92902 RN7SL760P-201ENST00000607344 270 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 AC138904.2-201ENST00000614412 107 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 OR52B5P-204ENST00000641744 3467 ntBASIC7.06□□□□□ -1.28
HPS1Q92902 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS1Q92902 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS1Q92902 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
HPS1Q92902 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
HPS1Q92902 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS1Q92902 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HPS1Q92902 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms