Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 NCOA4P2-201ENST00000340589 1813 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 SNORA70.2-201ENST00000364506 135 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 PEX12P1-201ENST00000400284 1048 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AL645608.4-201ENST00000423619 154 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 RPL7AP10-201ENST00000481016 791 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AP002981.1-201ENST00000517692 975 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AC090181.2-201ENST00000602975 672 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 TLK1P1-201ENST00000456760 2440 ntBASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM3Q8TF72 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL357515.1-201ENST00000402967 542 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 MIR1193-201ENST00000408109 78 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL591848.1-201ENST00000413092 322 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 MRPL35P2-201ENST00000448009 511 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL359073.1-201ENST00000448036 403 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AC020890.1-201ENST00000491837 504 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AC011815.3-201ENST00000624194 473 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AC135068.12-201ENST00000637370 931 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AC003985.2-201ENST00000562268 1669 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 ASNSP1-204ENST00000641977 1664 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL590240.1-201ENST00000334118 313 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 RPL10P10-201ENST00000403509 664 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL389915.1-201ENST00000422463 466 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 CHIAP3-201ENST00000423668 1133 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL136455.1-201ENST00000441083 1240 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 RN7SL41P-201ENST00000476144 297 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 RN7SKP260-201ENST00000516907 149 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 BNIP3P5-201ENST00000562290 498 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 MIR3160-1-201ENST00000577972 85 ntBASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM3Q8TF72 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AC011755.1-201ENST00000623763 2049 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 RNU1-85P-201ENST00000364127 164 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AP000580.1-201ENST00000404439 358 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 TBCAP2-201ENST00000416175 326 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 TXNP5-201ENST00000441043 315 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM3Q8TF72 snoU13.1-201ENST00000459157 104 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms