Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNA5SP87-201ENST00000384155 118 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 RNU4-31P-201ENST00000384211 141 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 ATP5F1P6-201ENST00000402768 767 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC009506.2-201ENST00000420635 840 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AL160175.1-201ENST00000428124 247 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC091390.1-201ENST00000433904 331 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 NANOGP9-201ENST00000439890 892 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 TRY2P-201ENST00000448860 689 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC092647.2-201ENST00000452998 253 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC012123.2-201ENST00000485809 248 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC092902.1-201ENST00000486999 259 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 RNA5SP373-201ENST00000517271 95 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 UBTFL9-201ENST00000534504 1148 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC034236.3-201ENST00000605999 461 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC093799.2-201ENST00000610062 578 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC087385.3-201ENST00000620477 187 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 FRG1DP-201ENST00000635586 771 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 AC004076.2-201ENST00000620532 3323 ntBASIC5.83□□□□□ -1.48
HERC6Q8IVU3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HERC6Q8IVU3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 MIR133A2-201ENST00000347538 102 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 RNA5SP453-201ENST00000362503 119 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 HMGB3P7-201ENST00000400214 611 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AL136131.1-201ENST00000406079 803 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 SNORA11-201ENST00000408789 128 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 RNU2-17P-201ENST00000410290 190 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC092570.3-201ENST00000420113 693 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 HSPE1P16-201ENST00000426640 348 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 VDAC1P6-201ENST00000430062 855 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 MTCYBP21-201ENST00000443300 1113 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 CLIC4P1-201ENST00000453177 535 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 RAB9BP1-201ENST00000519581 626 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC019227.1-201ENST00000526902 510 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 EDDM3DP-201ENST00000554692 434 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC011487.3-201ENST00000593607 453 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC110792.4-201ENST00000609843 298 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 RNA5SP439-201ENST00000617595 124 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 MIR7641-1-201ENST00000627518 61 ntBASIC5.82□□□□□ -1.48
HERC6Q8IVU3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HERC6Q8IVU3 THAP12P4-201ENST00000528321 2266 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms