Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 UBBP1-201ENST00000392399 473 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 MTCYBP36-201ENST00000404146 440 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 RN7SKP296-201ENST00000411185 341 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AL353729.1-201ENST00000425044 720 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 USP9YP12-201ENST00000450481 570 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC079776.3-201ENST00000450665 370 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 RPL23AP35-201ENST00000451906 501 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC068522.1-201ENST00000482895 345 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 RN7SL612P-201ENST00000497704 295 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC092349.1-201ENST00000504903 310 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC011352.3-201ENST00000505162 593 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 SNORA58-201ENST00000505219 137 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 OR5M14P-201ENST00000506803 618 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 IGKV2D-38-201ENST00000518423 240 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC073581.1-201ENST00000519036 575 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AF235103.2-201ENST00000525753 346 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 MTND1P35-201ENST00000526739 508 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PSMB7P1-201ENST00000556349 514 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC026470.2-201ENST00000561492 181 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC073091.2-201ENST00000603205 907 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AP000238.1-201ENST00000608759 426 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC005858.3-201ENST00000624756 589 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC135068.11-201ENST00000636378 921 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC087821.2-201ENST00000637086 450 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 MTCO1P23-201ENST00000415223 1526 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 NEPNP-201ENST00000404786 1371 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL034370.1-201ENST00000397254 1590 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 RNA5SP512-201ENST00000364550 120 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 MT-TR-201ENST00000387439 65 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL161631.1-201ENST00000417933 486 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC007435.1-201ENST00000421086 415 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 MTCO1P20-201ENST00000425366 358 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL513185.2-201ENST00000425543 193 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 RPL31P54-201ENST00000429803 370 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 GPM6BP2-201ENST00000432046 144 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 GPM6BP1-201ENST00000446387 144 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC239367.2-201ENST00000447309 705 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 RPL26P30-201ENST00000453533 435 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 SNORD42A-201ENST00000459584 64 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC112184.1-201ENST00000505179 312 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC083906.1-201ENST00000509298 406 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 OR52H2P-201ENST00000514607 902 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.704-201ENST00000516851 102 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms