Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC016739.1-201ENST00000405359 345 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 RN7SKP108-201ENST00000411367 328 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 RPS4XP16-201ENST00000427198 791 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 YY1P1-201ENST00000427625 668 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 GAPDHP58-201ENST00000438477 1006 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AL590004.3-202ENST00000445883 451 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC010683.1-201ENST00000473673 378 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 MTND6P6-201ENST00000478031 263 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC090686.1-201ENST00000481577 749 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 RN7SL570P-201ENST00000484405 292 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC112484.3-201ENST00000505910 329 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 MTCO1P31-201ENST00000506355 492 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 HMGN1P16-201ENST00000508308 283 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 NDUFB4P12-201ENST00000513465 390 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 RNA5SP249-201ENST00000516127 99 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 RNA5SP464-201ENST00000516251 108 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 OR5AN2P-201ENST00000534535 896 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 NOP56P3-201ENST00000549457 385 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC092332.1-201ENST00000563684 829 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 MIR4512-201ENST00000583257 77 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 VN1R84P-201ENST00000593697 235 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC244107.2-201ENST00000611773 76 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AL162233.1-201ENST00000620014 944 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 AC074029.4-201ENST00000624796 1859 ntBASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP4Q6PIL6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 RNU6-984P-201ENST00000363236 109 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 RN7SKP86-201ENST00000410454 332 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AC010385.1-201ENST00000412374 256 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 RPSAP35-201ENST00000413753 818 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AC124944.2-201ENST00000429866 1242 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 ZNF965P-201ENST00000432501 817 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 CBX1P4-201ENST00000439415 457 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AP000281.1-201ENST00000444036 316 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 RPL5P7-201ENST00000444235 813 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 TIMM8BP2-201ENST00000445940 251 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AL445466.1-201ENST00000448432 357 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 RPL7P31-201ENST00000450192 724 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AC118758.1-202ENST00000454719 225 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 NACAP5-201ENST00000509863 636 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AC027308.1-201ENST00000517993 110 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 VTA1P2-201ENST00000520205 911 ntBASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP4Q6PIL6 MIR4502-201ENST00000580432 81 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms