Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 MTCO1P40-201ENST00000574371 625 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC006504.3-201ENST00000586818 523 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL022154.1-201ENST00000604698 785 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AP000860.1-201ENST00000605250 559 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AC055764.2-201ENST00000610089 670 ntBASIC6.83□□□□□ -1.32
RNF43Q68DV7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF43Q68DV7 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RNF43Q68DV7 MTCO1P6-201ENST00000481192 1384 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC110716.2-201ENST00000563865 3945 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC007159.1-201ENST00000566529 4706 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 SNORA63-201ENST00000363450 132 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 RNU6-931P-201ENST00000363850 107 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 RNU6-348P-201ENST00000384386 107 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC013429.2-201ENST00000418798 781 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 MTCYBP24-201ENST00000420387 1106 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC112492.2-201ENST00000432774 1030 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC069154.1-201ENST00000432914 542 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AL627224.1-201ENST00000448334 444 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 RNA5SP269-201ENST00000459032 137 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 RPL5P13-201ENST00000462840 709 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC021087.2-201ENST00000504656 1203 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC093824.1-201ENST00000508796 343 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 ARL2BPP6-201ENST00000512757 439 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 HSD3BP3-201ENST00000514706 994 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AL442663.2-201ENST00000554385 511 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 BPTFP1-201ENST00000579209 492 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC063977.7-201ENST00000594454 337 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 KC877982.1-201ENST00000602313 470 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 YWHAQP7-201ENST00000603536 658 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 SNORD96A-201ENST00000606577 79 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 AC025048.6-202ENST00000627667 438 ntBASIC6.82□□□□□ -1.32
RNF43Q68DV7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF43Q68DV7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF43Q68DV7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC007485.2-201ENST00000623493 1667 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 NXF4-202ENST00000416098 1465 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF43Q68DV7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RNF43Q68DV7 RNA5SP65-201ENST00000363166 119 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 SNORA38B-201ENST00000363524 131 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 SUGT1P2-201ENST00000379452 992 ntBASIC6.81□□□□□ -1.32
RNF43Q68DV7 U3.52-201ENST00000384034 216 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms