Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 OR4U1P-201ENST00000554958 912 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC044913.1-201ENST00000557200 430 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC245036.5-201ENST00000596330 847 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 GAS5-AS1-201ENST00000602767 694 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 ELOCP35-201ENST00000604289 336 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC021749.1-201ENST00000604322 607 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RPSAP75-201ENST00000605848 301 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC016877.3-201ENST00000606778 504 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL133481.2-203ENST00000607558 139 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AP000238.1-201ENST00000608759 426 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC099676.1-201ENST00000608886 657 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC012676.3-201ENST00000614983 479 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC021755.4-201ENST00000616620 456 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC011755.1-201ENST00000623763 2049 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC007938.2-201ENST00000604666 2634 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 THAP12P9-201ENST00000503971 2360 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 RN7SKP59-201ENST00000410520 314 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 VN1R20P-201ENST00000425215 966 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC099782.1-201ENST00000425889 474 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC009784.1-201ENST00000426484 460 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC00328-2P-201ENST00000436585 219 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 RHEBP2-201ENST00000450289 600 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC002553.3-201ENST00000453002 341 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC011037.1-201ENST00000483964 558 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC113347.3-201ENST00000509113 148 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 ZNF519P4-201ENST00000514008 125 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MTND4LP24-201ENST00000572277 291 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MTND3P13-201ENST00000574391 343 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MIR5708-201ENST00000579723 85 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 NIFKP6-201ENST00000598115 845 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC025588.2-201ENST00000604851 466 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AL080312.2-201ENST00000613001 630 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 BNIP3P41-202ENST00000616656 861 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AL355974.3-201ENST00000617383 467 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 MIR6823-201ENST00000622118 61 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC007603.3-201ENST00000636915 979 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 AC099654.15-201ENST00000639802 509 ntBASIC5.57□□□□□ -1.52
RNF220Q5VTB9 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF220Q5VTB9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms