Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL031663.1-201ENST00000437445 219 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 NANOGP9-201ENST00000439890 892 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 BX248409.1-201ENST00000455497 255 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC113347.3-201ENST00000509113 148 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 TOMM22P4-201ENST00000511318 336 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC091078.2-201ENST00000557145 559 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC051619.2-201ENST00000559063 397 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC090695.1-201ENST00000561269 1222 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC010547.6-201ENST00000571789 193 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC099676.1-201ENST00000608886 657 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AL021918.2-201ENST00000613415 194 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC139769.3-201ENST00000618383 175 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AP001153.1-201ENST00000641024 338 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AL161756.3-201ENST00000641216 2071 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 MTND4P8-201ENST00000514997 1362 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL034546.1-201ENST00000623740 3693 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 RN7SKP128-201ENST00000364270 303 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 MIR143-201ENST00000385300 106 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL596448.1-201ENST00000415024 392 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL356320.2-201ENST00000417263 507 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC048351.1-201ENST00000420064 602 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC010099.3-201ENST00000423896 409 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 KRT8P51-201ENST00000438938 274 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 CBX1P4-201ENST00000439415 457 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC073522.1-201ENST00000483312 377 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC011037.1-201ENST00000483964 558 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 SNORA70.20-201ENST00000516848 126 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC136777.2-201ENST00000522979 358 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 OR8A2P-201ENST00000528631 952 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC061975.8-201ENST00000587058 721 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC013244.1-201ENST00000604279 193 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AL353726.1-201ENST00000614041 1000 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 AC015726.3-201ENST00000624501 418 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 MTND2P41-201ENST00000637599 773 ntBASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC144BQ3MJ40 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC144BQ3MJ40 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms