Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HMGB1P10-201ENST00000395823 563 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AC009804.1-201ENST00000400949 179 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 RNU2-17P-201ENST00000410290 190 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AL445213.1-201ENST00000412589 747 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AL024507.1-201ENST00000412741 274 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 BX664727.1-201ENST00000416024 466 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 MTCYBP12-201ENST00000440559 1134 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 AL096829.2-201ENST00000446582 742 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 CALM1P2-201ENST00000452941 448 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AZGP1P2-201ENST00000454506 345 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 TVP23BP2-201ENST00000455082 615 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AC008379.1-201ENST00000463655 464 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 PPM1AP1-201ENST00000502740 1135 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC016559.2-201ENST00000510759 359 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 BX510359.5-201ENST00000515651 304 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 RNU6-415P-201ENST00000516252 97 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC079064.1-201ENST00000528365 362 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.93□□□□□ -1.62
CLDN20P56880 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC245884.10-201ENST00000597355 337 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AL355816.2-201ENST00000610049 647 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 MIR6826-201ENST00000617808 98 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 AL356118.1-201ENST00000635272 1078 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 AL445984.1-201ENST00000637834 659 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 AC073869.7-201ENST00000640874 297 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 CASC19-281ENST00000642118 1554 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 AL353796.1-201ENST00000561542 3241 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 AL731532.2-201ENST00000623542 1953 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 MTND5P11-201ENST00000511037 1812 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN20P56880 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN20P56880 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN20P56880 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN20P56880 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC097063.1-201ENST00000426714 1797 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN20P56880 RPL35AP24-201ENST00000413846 330 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 COX5BP7-201ENST00000414780 274 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN20P56880 RIMKLBP2-201ENST00000424737 654 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.92□□□□□ -1.62
CLDN20P56880 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC105399.1-202ENST00000447303 205 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 IGBP1P3-201ENST00000447449 1000 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLDN20P56880 PRPF38AP1-201ENST00000451976 933 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 RPL7P45-201ENST00000455851 743 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC245028.2-201ENST00000458673 253 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN20P56880 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN20P56880 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 UBA52P7-201ENST00000486088 380 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN20P56880 MYL12BP2-201ENST00000503948 512 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.92□□□□□ -1.62
CLDN20P56880 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC108120.2-201ENST00000512973 294 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 IGHV3-63-201ENST00000518422 341 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN20P56880 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN20P56880 BLZF2P-201ENST00000553776 1130 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN20P56880 AC104229.1-201ENST00000561364 255 ntBASIC4.92□□□□□ -1.62
CLDN20P56880 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms