Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMC4P56277 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMC4P56277 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMC4P56277 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CMC4P56277 AC131971.1-201ENST00000332881 1482 ntBASIC3.73□□□□□ -1.81
CMC4P56277 AC092376.2-201ENST00000622621 4116 ntBASIC3.72□□□□□ -1.81
CMC4P56277 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CMC4P56277 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CMC4P56277 SDAD1P1-202ENST00000524156 2051 ntBASIC3.72□□□□□ -1.81
CMC4P56277 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CMC4P56277 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.72□□□□□ -1.81
CMC4P56277 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.72□□□□□ -1.81
CMC4P56277 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.72□□□□□ -1.81
CMC4P56277 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CMC4P56277 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CMC4P56277 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.72□□□□□ -1.81
CMC4P56277 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 AL589647.1-201ENST00000402485 466 ntBASIC3.72□□□□□ -1.81
CMC4P56277 SNORA77-201ENST00000408716 125 ntBASIC3.72□□□□□ -1.81
CMC4P56277 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.72□□□□□ -1.81
CMC4P56277 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.72□□□□□ -1.81
CMC4P56277 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.72□□□□□ -1.81
CMC4P56277 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.72□□□□□ -1.81
CMC4P56277 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 GTF3AP5-201ENST00000442645 697 ntBASIC3.72□□□□□ -1.81
CMC4P56277 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.72□□□□□ -1.81
CMC4P56277 MTND4LP12-201ENST00000448237 295 ntBASIC3.72□□□□□ -1.81
CMC4P56277 RAB28P3-201ENST00000448325 597 ntBASIC3.72□□□□□ -1.81
CMC4P56277 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.72□□□□□ -1.81
CMC4P56277 SEPT14P1-201ENST00000458703 648 ntBASIC3.72□□□□□ -1.81
CMC4P56277 RN7SL610P-201ENST00000463845 291 ntBASIC3.72□□□□□ -1.81
CMC4P56277 AC021660.1-201ENST00000465006 554 ntBASIC3.72□□□□□ -1.81
CMC4P56277 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.72□□□□□ -1.81
CMC4P56277 OR11I1P-201ENST00000486033 954 ntBASIC3.72□□□□□ -1.81
CMC4P56277 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CMC4P56277 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.72□□□□□ -1.81
CMC4P56277 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.72□□□□□ -1.81
CMC4P56277 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.72□□□□□ -1.81
CMC4P56277 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.72□□□□□ -1.81
CMC4P56277 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.72□□□□□ -1.81
CMC4P56277 AC116553.2-201ENST00000564203 463 ntBASIC3.72□□□□□ -1.81
CMC4P56277 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 SNORD39.2-201ENST00000579995 76 ntBASIC3.72□□□□□ -1.81
CMC4P56277 SNORA74C-1-201ENST00000580726 201 ntBASIC3.72□□□□□ -1.81
CMC4P56277 AC011840.5-201ENST00000582125 771 ntBASIC3.72□□□□□ -1.81
CMC4P56277 OR7M1P-201ENST00000608946 533 ntBASIC3.72□□□□□ -1.81
CMC4P56277 AC112694.2-201ENST00000623697 768 ntBASIC3.72□□□□□ -1.81
CMC4P56277 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CMC4P56277 INTS6P1-201ENST00000504674 2530 ntBASIC3.72□□□□□ -1.81
CMC4P56277 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CMC4P56277 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.72□□□□□ -1.81
CMC4P56277 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
CMC4P56277 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.71□□□□□ -1.81
CMC4P56277 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.71□□□□□ -1.81
CMC4P56277 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.71□□□□□ -1.81
CMC4P56277 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
CMC4P56277 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.81
CMC4P56277 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC3.71□□□□□ -1.82
CMC4P56277 ZFRP1-201ENST00000457579 2970 ntBASIC3.71□□□□□ -1.82
CMC4P56277 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CMC4P56277 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CMC4P56277 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 AL133270.1-201ENST00000402635 279 ntBASIC3.71□□□□□ -1.82
CMC4P56277 DPPA2P3-201ENST00000411853 655 ntBASIC3.71□□□□□ -1.82
CMC4P56277 AC114755.2-201ENST00000413520 361 ntBASIC3.71□□□□□ -1.82
CMC4P56277 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.71□□□□□ -1.82
CMC4P56277 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.71□□□□□ -1.82
CMC4P56277 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.71□□□□□ -1.82
CMC4P56277 AC104333.2-201ENST00000422630 192 ntBASIC3.71□□□□□ -1.82
CMC4P56277 BRWD1P3-201ENST00000428816 390 ntBASIC3.71□□□□□ -1.82
CMC4P56277 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.71□□□□□ -1.82
CMC4P56277 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.71□□□□□ -1.82
CMC4P56277 AL450023.3-201ENST00000440592 271 ntBASIC3.71□□□□□ -1.82
CMC4P56277 TCEA1P3-201ENST00000443005 880 ntBASIC3.71□□□□□ -1.82
CMC4P56277 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CMC4P56277 IGHV5-78-201ENST00000450948 295 ntBASIC3.71□□□□□ -1.82
CMC4P56277 GAPDHP56-201ENST00000506031 988 ntBASIC3.71□□□□□ -1.82
CMC4P56277 NDUFB5P1-201ENST00000508134 564 ntBASIC3.71□□□□□ -1.82
CMC4P56277 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.71□□□□□ -1.82
CMC4P56277 RNA5SP43-201ENST00000516559 110 ntBASIC3.71□□□□□ -1.82
CMC4P56277 RPL23AP53-201ENST00000521854 457 ntBASIC3.71□□□□□ -1.82
CMC4P56277 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.71□□□□□ -1.82
CMC4P56277 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.71□□□□□ -1.82
CMC4P56277 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.71□□□□□ -1.82
CMC4P56277 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.71□□□□□ -1.82
CMC4P56277 AP000619.2-201ENST00000546014 969 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms