Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.77□□□□□ -1.01
ATN1P54259 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ATN1P54259 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.76□□□□□ -1.01
ATN1P54259 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC8.76□□□□□ -1.01
ATN1P54259 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
ATN1P54259 Y_RNA.404-201ENST00000383978 102 ntBASIC8.76□□□□□ -1.01
ATN1P54259 SNORD116-23-201ENST00000384645 92 ntBASIC8.76□□□□□ -1.01
ATN1P54259 RNU6-903P-201ENST00000391270 109 ntBASIC8.76□□□□□ -1.01
ATN1P54259 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 AL358942.1-201ENST00000418595 1178 ntBASIC8.76□□□□□ -1.01
ATN1P54259 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC8.76□□□□□ -1.01
ATN1P54259 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC8.76□□□□□ -1.01
ATN1P54259 C4BPAP2-201ENST00000428434 478 ntBASIC8.76□□□□□ -1.01
ATN1P54259 AC105052.2-201ENST00000434317 794 ntBASIC8.76□□□□□ -1.01
ATN1P54259 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC8.76□□□□□ -1.01
ATN1P54259 TRBVB-201ENST00000477100 408 ntBASIC8.76□□□□□ -1.01
ATN1P54259 AC022447.4-201ENST00000504053 364 ntBASIC8.76□□□□□ -1.01
ATN1P54259 RNU6-346P-201ENST00000516288 111 ntBASIC8.76□□□□□ -1.01
ATN1P54259 RNU6-1308P-201ENST00000516817 103 ntBASIC8.76□□□□□ -1.01
ATN1P54259 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.76□□□□□ -1.01
ATN1P54259 AC090136.1-201ENST00000520009 240 ntBASIC8.76□□□□□ -1.01
ATN1P54259 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.76□□□□□ -1.01
ATN1P54259 AP006587.4-201ENST00000526053 529 ntBASIC8.76□□□□□ -1.01
ATN1P54259 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 MIR3137-201ENST00000577367 75 ntBASIC8.76□□□□□ -1.01
ATN1P54259 SIGLEC31P-201ENST00000594237 551 ntBASIC8.76□□□□□ -1.01
ATN1P54259 Z82243.1-201ENST00000609432 473 ntBASIC8.76□□□□□ -1.01
ATN1P54259 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.76□□□□□ -1.01
ATN1P54259 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ATN1P54259 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.76□□□□□ -1.01
ATN1P54259 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
ATN1P54259 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
ATN1P54259 AC092125.1-201ENST00000562568 1995 ntBASIC8.75□□□□□ -1.01
ATN1P54259 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 RN7SKP23-201ENST00000625159 4301 ntBASIC8.75□□□□□ -1.01
ATN1P54259 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.75□□□□□ -1.01
ATN1P54259 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.75□□□□□ -1.01
ATN1P54259 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
ATN1P54259 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 Y_RNA.26-201ENST00000362539 101 ntBASIC8.75□□□□□ -1.01
ATN1P54259 RNA5SP389-201ENST00000362610 115 ntBASIC8.75□□□□□ -1.01
ATN1P54259 RNA5SP226-201ENST00000362653 115 ntBASIC8.75□□□□□ -1.01
ATN1P54259 RNU6-552P-201ENST00000362869 119 ntBASIC8.75□□□□□ -1.01
ATN1P54259 Y_RNA.378-201ENST00000365652 113 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AL672167.2-201ENST00000377164 879 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AL080285.1-201ENST00000404225 984 ntBASIC8.75□□□□□ -1.01
ATN1P54259 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.75□□□□□ -1.01
ATN1P54259 AC003071.2-201ENST00000423857 315 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC8.75□□□□□ -1.01
ATN1P54259 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.75□□□□□ -1.01
ATN1P54259 RPS7P4-201ENST00000444127 582 ntBASIC8.75□□□□□ -1.01
ATN1P54259 HMGN1P2-201ENST00000445197 310 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AL445687.2-201ENST00000458156 728 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AC022493.2-201ENST00000506122 481 ntBASIC8.75□□□□□ -1.01
ATN1P54259 SNORA25.11-201ENST00000515935 105 ntBASIC8.75□□□□□ -1.01
ATN1P54259 OR52K3P-201ENST00000531655 943 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.75□□□□□ -1.01
ATN1P54259 SETP2-201ENST00000553886 926 ntBASIC8.75□□□□□ -1.01
ATN1P54259 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.75□□□□□ -1.01
ATN1P54259 MT1L-202ENST00000566367 78 ntBASIC8.75□□□□□ -1.01
ATN1P54259 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC8.75□□□□□ -1.01
ATN1P54259 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC8.75□□□□□ -1.01
ATN1P54259 AP001823.1-201ENST00000604056 1003 ntBASIC8.75□□□□□ -1.01
ATN1P54259 MIR6070-201ENST00000613967 103 ntBASIC8.75□□□□□ -1.01
ATN1P54259 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ATN1P54259 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms