Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.78□□□□□ -1.48
COPB1P53618 AL078595.3-201ENST00000623815 1166 ntBASIC5.78□□□□□ -1.48
COPB1P53618 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.78□□□□□ -1.48
COPB1P53618 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 AC026523.2-201ENST00000625039 7739 ntBASIC5.78□□□□□ -1.48
COPB1P53618 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.77□□□□□ -1.49
COPB1P53618 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.77□□□□□ -1.49
COPB1P53618 RN7SKP292-201ENST00000365522 317 ntBASIC5.77□□□□□ -1.49
COPB1P53618 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 AC211486.3-201ENST00000412694 621 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AL158050.1-201ENST00000416077 457 ntBASIC5.77□□□□□ -1.49
COPB1P53618 VPS26BP1-201ENST00000417155 755 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.77□□□□□ -1.49
COPB1P53618 TNPO1P1-201ENST00000423641 1138 ntBASIC5.77□□□□□ -1.49
COPB1P53618 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.77□□□□□ -1.49
COPB1P53618 BRWD1P3-201ENST00000428816 390 ntBASIC5.77□□□□□ -1.49
COPB1P53618 CLUHP1-201ENST00000435012 1190 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC245517.2-201ENST00000442890 346 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 HMGN1P36-201ENST00000446623 298 ntBASIC5.77□□□□□ -1.49
COPB1P53618 BX842559.2-201ENST00000451418 605 ntBASIC5.77□□□□□ -1.49
COPB1P53618 RN7SL177P-201ENST00000476596 299 ntBASIC5.77□□□□□ -1.49
COPB1P53618 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 AL136038.1-201ENST00000497246 351 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.77□□□□□ -1.49
COPB1P53618 AC093534.1-201ENST00000504977 132 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.77□□□□□ -1.49
COPB1P53618 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.77□□□□□ -1.49
COPB1P53618 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.77□□□□□ -1.49
COPB1P53618 RNU6-1334P-201ENST00000516032 105 ntBASIC5.77□□□□□ -1.49
COPB1P53618 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.77□□□□□ -1.49
COPB1P53618 AC034205.1-201ENST00000520621 638 ntBASIC5.77□□□□□ -1.49
COPB1P53618 LSM3P2-201ENST00000551246 273 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC006349.1-201ENST00000555526 235 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AGGF1P9-201ENST00000561884 913 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC010547.6-201ENST00000571789 193 ntBASIC5.77□□□□□ -1.49
COPB1P53618 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 AC004223.2-201ENST00000590309 544 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.77□□□□□ -1.49
COPB1P53618 BNIP3P32-201ENST00000600015 554 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC015849.2-201ENST00000605738 409 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC112503.1-201ENST00000608436 391 ntBASIC5.77□□□□□ -1.49
COPB1P53618 AC009974.1-201ENST00000608881 455 ntBASIC5.77□□□□□ -1.49
COPB1P53618 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 AC003985.2-201ENST00000562268 1669 ntBASIC5.77□□□□□ -1.49
COPB1P53618 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COPB1P53618 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPB1P53618 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
COPB1P53618 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 SEPT7P7-201ENST00000420492 1301 ntBASIC5.76□□□□□ -1.49
COPB1P53618 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.76□□□□□ -1.49
COPB1P53618 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COPB1P53618 RNA5SP223-201ENST00000365174 120 ntBASIC5.76□□□□□ -1.49
COPB1P53618 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 MIR143-201ENST00000385300 106 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AF228730.1-201ENST00000397972 663 ntBASIC5.76□□□□□ -1.49
COPB1P53618 HSPA8P15-201ENST00000401676 786 ntBASIC5.76□□□□□ -1.49
COPB1P53618 TCEA1P2-201ENST00000420496 906 ntBASIC5.76□□□□□ -1.49
COPB1P53618 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 MGAT2P2-201ENST00000427194 797 ntBASIC5.76□□□□□ -1.49
COPB1P53618 GAPDHP58-201ENST00000438477 1006 ntBASIC5.76□□□□□ -1.49
COPB1P53618 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 MYO5BP2-201ENST00000449815 1277 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AC026348.1-201ENST00000462549 1053 ntBASIC5.76□□□□□ -1.49
COPB1P53618 RN7SL273P-201ENST00000481561 299 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AC105233.1-201ENST00000498840 781 ntBASIC5.76□□□□□ -1.49
COPB1P53618 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.76□□□□□ -1.49
COPB1P53618 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.76□□□□□ -1.49
COPB1P53618 TMEM97P2-201ENST00000517841 403 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AC027308.1-201ENST00000517993 110 ntBASIC5.76□□□□□ -1.49
COPB1P53618 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.76□□□□□ -1.49
COPB1P53618 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.76□□□□□ -1.49
COPB1P53618 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
COPB1P53618 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COPB1P53618 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.76□□□□□ -1.49
COPB1P53618 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.76□□□□□ -1.49
COPB1P53618 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.76□□□□□ -1.49
COPB1P53618 BLZF2P-201ENST00000553776 1130 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms