Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNA5SP273-201ENST00000362484 113 ntBASIC6.57□□□□□ -1.36
MRE11P49959 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 ATP5F1P2-201ENST00000398143 760 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AL158050.1-201ENST00000416077 457 ntBASIC6.57□□□□□ -1.36
MRE11P49959 RPL21P50-201ENST00000417698 477 ntBASIC6.57□□□□□ -1.36
MRE11P49959 GNG5P5-201ENST00000420444 220 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 USP9YP28-201ENST00000435142 589 ntBASIC6.57□□□□□ -1.36
MRE11P49959 VN1R110P-201ENST00000438988 971 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.57□□□□□ -1.36
MRE11P49959 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.57□□□□□ -1.36
MRE11P49959 AL161722.1-201ENST00000446972 1032 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.57□□□□□ -1.36
MRE11P49959 AC004263.1-201ENST00000479327 332 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC116562.1-201ENST00000485355 781 ntBASIC6.57□□□□□ -1.36
MRE11P49959 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.57□□□□□ -1.36
MRE11P49959 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.57□□□□□ -1.36
MRE11P49959 MTCO1P31-201ENST00000506355 492 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 FABP5P6-201ENST00000510588 409 ntBASIC6.57□□□□□ -1.36
MRE11P49959 KHDC1P1-201ENST00000511053 508 ntBASIC6.57□□□□□ -1.36
MRE11P49959 RNA5SP418-201ENST00000515951 117 ntBASIC6.57□□□□□ -1.36
MRE11P49959 Y_RNA.667-201ENST00000516212 107 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC091163.3-201ENST00000518269 1144 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.57□□□□□ -1.36
MRE11P49959 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 GSTP1P1-201ENST00000548078 319 ntBASIC6.57□□□□□ -1.36
MRE11P49959 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 RN7SL290P-201ENST00000578661 300 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 MIR3936-201ENST00000584304 110 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC005242.1-201ENST00000585658 438 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.57□□□□□ -1.36
MRE11P49959 AC068790.2-201ENST00000602601 557 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC005252.1-201ENST00000604518 1063 ntBASIC6.57□□□□□ -1.36
MRE11P49959 RNU6-84P-201ENST00000607737 102 ntBASIC6.57□□□□□ -1.36
MRE11P49959 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.57□□□□□ -1.36
MRE11P49959 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
MRE11P49959 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MRE11P49959 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MRE11P49959 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MRE11P49959 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 LINC01963-201ENST00000562038 3148 ntBASIC6.56□□□□□ -1.36
MRE11P49959 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.56□□□□□ -1.36
MRE11P49959 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 RNU6-354P-201ENST00000383862 107 ntBASIC6.56□□□□□ -1.36
MRE11P49959 RNU6-610P-201ENST00000384264 107 ntBASIC6.56□□□□□ -1.36
MRE11P49959 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MRE11P49959 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MRE11P49959 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.56□□□□□ -1.36
MRE11P49959 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.56□□□□□ -1.36
MRE11P49959 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.56□□□□□ -1.36
MRE11P49959 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 ARL5AP3-201ENST00000439327 386 ntBASIC6.56□□□□□ -1.36
MRE11P49959 RPL12P3-201ENST00000440080 396 ntBASIC6.56□□□□□ -1.36
MRE11P49959 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 MTCYBP21-201ENST00000443300 1113 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AL445665.1-202ENST00000452436 324 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 CST12P-201ENST00000457644 362 ntBASIC6.56□□□□□ -1.36
MRE11P49959 RNU1-88P-201ENST00000459274 128 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC104849.1-201ENST00000462623 405 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC008379.1-201ENST00000463655 464 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC021660.1-201ENST00000465006 554 ntBASIC6.56□□□□□ -1.36
MRE11P49959 SETP6-201ENST00000479329 568 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.56□□□□□ -1.36
MRE11P49959 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 ASNSP4-201ENST00000511103 447 ntBASIC6.56□□□□□ -1.36
MRE11P49959 Y_RNA.688-201ENST00000516565 95 ntBASIC6.56□□□□□ -1.36
MRE11P49959 HAUS1P3-201ENST00000523909 662 ntBASIC6.56□□□□□ -1.36
MRE11P49959 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MRE11P49959 AC008126.1-201ENST00000549019 480 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AL512310.9-201ENST00000553311 948 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AL442163.2-201ENST00000553912 710 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC127381.1-201ENST00000555979 939 ntBASIC6.56□□□□□ -1.36
MRE11P49959 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 AC040958.1-201ENST00000561102 201 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms