Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC6A4P31645 IGKV2-19-201ENST00000518132 283 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.8□□□□□ -1.48
SLC6A4P31645 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC6A4P31645 ZNF321P-202ENST00000550843 495 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC6A4P31645 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC6A4P31645 RBM22P12-201ENST00000567098 1255 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 ZNF92P3-201ENST00000596594 954 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC6A4P31645 AC100847.1-201ENST00000611316 481 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AL512624.1-201ENST00000613638 469 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AC005899.7-201ENST00000618199 588 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AL121890.3-201ENST00000618494 516 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 AC010975.3-201ENST00000618727 978 ntBASIC5.8□□□□□ -1.48
SLC6A4P31645 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.8□□□□□ -1.48
SLC6A4P31645 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC6A4P31645 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SLC6A4P31645 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC6A4P31645 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC6A4P31645 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
SLC6A4P31645 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SLC6A4P31645 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 SAMMSON-210ENST00000641260 1308 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC137056.2-201ENST00000624055 1958 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SLC6A4P31645 RNA5SP234-201ENST00000363916 119 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC6A4P31645 GAPDHP42-201ENST00000406848 981 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 RN7SKP278-201ENST00000410504 342 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 RN7SKP279-201ENST00000411383 298 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC096921.1-201ENST00000411661 375 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 RPS4XP16-201ENST00000427198 791 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.79□□□□□ -1.48
SLC6A4P31645 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 EEF1A1P39-201ENST00000440791 250 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 OTX2P1-201ENST00000450956 354 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC6A4P31645 PRDX3P4-201ENST00000470828 747 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC105420.1-201ENST00000504389 582 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC034244.1-201ENST00000507687 207 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 HMGB1P1-201ENST00000522557 636 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.79□□□□□ -1.48
SLC6A4P31645 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 MTND4LP24-201ENST00000572277 291 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 MIR4311-201ENST00000580794 100 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC6A4P31645 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC6A4P31645 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC091057.2-201ENST00000602594 792 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC005252.1-201ENST00000604518 1063 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC005377.1-201ENST00000605126 456 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 NANOGP3-201ENST00000605855 286 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC6A4P31645 OR2BH1P-201ENST00000608850 864 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AL138478.1-201ENST00000612252 832 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC025574.2-201ENST00000615621 514 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AL121895.2-201ENST00000619558 447 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 OR1S1-201ENST00000624470 978 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC024023.1-201ENST00000624530 922 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC068620.4-201ENST00000636730 1182 ntBASIC5.79□□□□□ -1.48
SLC6A4P31645 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC6A4P31645 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC6A4P31645 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 MSL3P1-202ENST00000440028 1468 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms