Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 AC140479.2-201ENST00000421567 3130 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 MAPK10-270ENST00000641102 3538 ntBASIC5.55□□□□□ -1.52
CD40P25942 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 AL158152.1-201ENST00000602652 1435 ntBASIC5.55□□□□□ -1.52
CD40P25942 AL031651.1-201ENST00000615357 1438 ntBASIC5.55□□□□□ -1.52
CD40P25942 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD40P25942 MTND5P29-201ENST00000458676 1807 ntBASIC5.55□□□□□ -1.52
CD40P25942 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CD40P25942 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40P25942 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40P25942 AC010624.4-201ENST00000597606 1351 ntBASIC5.55□□□□□ -1.52
CD40P25942 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 AL512646.1-201ENST00000269395 1077 ntBASIC5.54□□□□□ -1.52
CD40P25942 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CD40P25942 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 RNA5SP188-201ENST00000362916 129 ntBASIC5.54□□□□□ -1.52
CD40P25942 RNU6-374P-201ENST00000364146 108 ntBASIC5.54□□□□□ -1.52
CD40P25942 USP9YP33-201ENST00000412220 421 ntBASIC5.54□□□□□ -1.52
CD40P25942 RPL7AP14-201ENST00000424041 802 ntBASIC5.54□□□□□ -1.52
CD40P25942 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 PPIAP13-201ENST00000434706 478 ntBASIC5.54□□□□□ -1.52
CD40P25942 USP9YP35-201ENST00000435696 412 ntBASIC5.54□□□□□ -1.52
CD40P25942 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 NDUFA5P7-201ENST00000452914 242 ntBASIC5.54□□□□□ -1.52
CD40P25942 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 RN7SL254P-201ENST00000460609 284 ntBASIC5.54□□□□□ -1.52
CD40P25942 RN7SL643P-201ENST00000471845 291 ntBASIC5.54□□□□□ -1.52
CD40P25942 AC005912.1-201ENST00000495392 255 ntBASIC5.54□□□□□ -1.52
CD40P25942 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 HMGB1P44-201ENST00000508597 572 ntBASIC5.54□□□□□ -1.52
CD40P25942 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 ZNF519P4-201ENST00000514008 125 ntBASIC5.54□□□□□ -1.52
CD40P25942 HSD3BP3-201ENST00000514706 994 ntBASIC5.54□□□□□ -1.52
CD40P25942 RNU6-1261P-201ENST00000517194 104 ntBASIC5.54□□□□□ -1.52
CD40P25942 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.54□□□□□ -1.52
CD40P25942 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 AL845552.1-201ENST00000556820 323 ntBASIC5.54□□□□□ -1.52
CD40P25942 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 AC026826.3-201ENST00000561747 158 ntBASIC5.54□□□□□ -1.52
CD40P25942 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.54□□□□□ -1.52
CD40P25942 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.54□□□□□ -1.52
CD40P25942 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 AC092354.2-201ENST00000607786 514 ntBASIC5.54□□□□□ -1.52
CD40P25942 MIR7844-201ENST00000616161 122 ntBASIC5.54□□□□□ -1.52
CD40P25942 AC234782.5-201ENST00000617723 324 ntBASIC5.54□□□□□ -1.52
CD40P25942 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40P25942 AL356266.1-201ENST00000623311 483 ntBASIC5.54□□□□□ -1.52
CD40P25942 AL132640.3-201ENST00000630473 177 ntBASIC5.54□□□□□ -1.52
CD40P25942 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.54□□□□□ -1.52
CD40P25942 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CD40P25942 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CD40P25942 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CD40P25942 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.54□□□□□ -1.52
CD40P25942 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40P25942 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CD40P25942 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 AC022507.1-201ENST00000548349 1505 ntBASIC5.53□□□□□ -1.52
CD40P25942 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40P25942 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.53□□□□□ -1.52
CD40P25942 AC025809.2-201ENST00000625085 1802 ntBASIC5.53□□□□□ -1.52
CD40P25942 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms