Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC01808-202ENST00000641680 1116 ntBASIC6.22□□□□□ -1.41
PTPN1P18031 ZNF663P-202ENST00000641770 1131 ntBASIC6.22□□□□□ -1.41
PTPN1P18031 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
PTPN1P18031 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.22□□□□□ -1.41
PTPN1P18031 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN1P18031 VN2R3P-201ENST00000422626 1412 ntBASIC6.22□□□□□ -1.41
PTPN1P18031 AC106872.5-201ENST00000508856 1416 ntBASIC6.22□□□□□ -1.41
PTPN1P18031 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN1P18031 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.21□□□□□ -1.41
PTPN1P18031 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
PTPN1P18031 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PTPN1P18031 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PTPN1P18031 AC022164.1-201ENST00000568767 2673 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 SNORA40.2-201ENST00000390847 128 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AL034403.1-201ENST00000399414 885 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 Y_RNA.599-201ENST00000410489 109 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 MTND1P32-201ENST00000433043 938 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 AL138878.2-201ENST00000440581 1241 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 DNAJC19P5-201ENST00000443295 316 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AL445665.1-202ENST00000452436 324 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 BTG4P1-201ENST00000510421 183 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 RNU6-232P-201ENST00000517144 64 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PTPN1P18031 AC010198.2-201ENST00000550612 259 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 AC009237.12-201ENST00000604755 742 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 FRG1HP-204ENST00000617940 757 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AP004607.9-201ENST00000618202 316 ntBASIC6.21□□□□□ -1.42
PTPN1P18031 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN1P18031 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN1P18031 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTPN1P18031 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN1P18031 AC090220.1-201ENST00000593078 1699 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN1P18031 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN1P18031 AC015689.2-201ENST00000528172 1738 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN1P18031 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN1P18031 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.2□□□□□ -1.42
PTPN1P18031 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PTPN1P18031 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PTPN1P18031 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 Y_RNA.77-201ENST00000362962 107 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 SNORD1C-201ENST00000363315 78 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 RNU6-304P-201ENST00000364855 107 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN1P18031 RNU6-549P-201ENST00000384433 107 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 RNA5SP284-201ENST00000384547 118 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 RNU6-192P-201ENST00000391253 100 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 AL031985.1-201ENST00000392713 418 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 RPS3AP26-201ENST00000398259 784 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 RPL23AP17-201ENST00000401064 499 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 AL021407.1-201ENST00000404531 386 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.2□□□□□ -1.42
PTPN1P18031 MTND6P12-201ENST00000428247 522 ntBASIC6.2□□□□□ -1.42
PTPN1P18031 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN1P18031 AC010153.1-201ENST00000432862 727 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms