Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.56□□□□□ -1.36
NID1P14543 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.56□□□□□ -1.36
NID1P14543 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.56□□□□□ -1.36
NID1P14543 AC025260.1-201ENST00000548858 430 ntBASIC6.56□□□□□ -1.36
NID1P14543 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.56□□□□□ -1.36
NID1P14543 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NID1P14543 AC110588.1-201ENST00000559699 137 ntBASIC6.56□□□□□ -1.36
NID1P14543 AL845331.3-202ENST00000562856 261 ntBASIC6.56□□□□□ -1.36
NID1P14543 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.56□□□□□ -1.36
NID1P14543 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NID1P14543 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.56□□□□□ -1.36
NID1P14543 MIR4470-201ENST00000583453 72 ntBASIC6.56□□□□□ -1.36
NID1P14543 IGLJCOR18-201ENST00000584002 424 ntBASIC6.56□□□□□ -1.36
NID1P14543 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.56□□□□□ -1.36
NID1P14543 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.56□□□□□ -1.36
NID1P14543 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.56□□□□□ -1.36
NID1P14543 AL078624.2-201ENST00000605063 554 ntBASIC6.56□□□□□ -1.36
NID1P14543 AC005332.6-201ENST00000613178 446 ntBASIC6.56□□□□□ -1.36
NID1P14543 AC129778.1-202ENST00000623812 261 ntBASIC6.56□□□□□ -1.36
NID1P14543 FKBP1AP4-201ENST00000631775 336 ntBASIC6.56□□□□□ -1.36
NID1P14543 AL591379.1-207ENST00000635982 261 ntBASIC6.56□□□□□ -1.36
NID1P14543 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.56□□□□□ -1.36
NID1P14543 TMEM75-201ENST00000624314 2165 ntBASIC6.56□□□□□ -1.36
NID1P14543 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NID1P14543 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NID1P14543 OR2A3P-202ENST00000641249 1776 ntBASIC6.56□□□□□ -1.36
NID1P14543 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NID1P14543 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NID1P14543 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.56□□□□□ -1.36
NID1P14543 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NID1P14543 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NID1P14543 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NID1P14543 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
NID1P14543 NCOA4P3-201ENST00000513203 1877 ntBASIC6.56□□□□□ -1.36
NID1P14543 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NID1P14543 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NID1P14543 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.55□□□□□ -1.36
NID1P14543 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.55□□□□□ -1.36
NID1P14543 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NID1P14543 Y_RNA.133-201ENST00000363428 110 ntBASIC6.55□□□□□ -1.36
NID1P14543 Y_RNA.384-201ENST00000383909 102 ntBASIC6.55□□□□□ -1.36
NID1P14543 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NID1P14543 SOD1P1-201ENST00000407803 440 ntBASIC6.55□□□□□ -1.36
NID1P14543 RPL23AP47-201ENST00000408017 460 ntBASIC6.55□□□□□ -1.36
NID1P14543 AL359704.1-201ENST00000411586 781 ntBASIC6.55□□□□□ -1.36
NID1P14543 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 AL353678.1-201ENST00000422735 741 ntBASIC6.55□□□□□ -1.36
NID1P14543 RPL35AP12-201ENST00000425362 338 ntBASIC6.55□□□□□ -1.36
NID1P14543 CYP4F34P-201ENST00000425951 481 ntBASIC6.55□□□□□ -1.36
NID1P14543 DSTNP5-201ENST00000427921 523 ntBASIC6.55□□□□□ -1.36
NID1P14543 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.55□□□□□ -1.36
NID1P14543 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.55□□□□□ -1.36
NID1P14543 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.55□□□□□ -1.36
NID1P14543 TREML3P-201ENST00000457327 501 ntBASIC6.55□□□□□ -1.36
NID1P14543 RNU6-420P-201ENST00000458780 107 ntBASIC6.55□□□□□ -1.36
NID1P14543 SNORA81.1-201ENST00000458922 177 ntBASIC6.55□□□□□ -1.36
NID1P14543 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NID1P14543 AC091564.1-201ENST00000464563 479 ntBASIC6.55□□□□□ -1.36
NID1P14543 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.55□□□□□ -1.36
NID1P14543 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 AC093809.1-201ENST00000509155 340 ntBASIC6.55□□□□□ -1.36
NID1P14543 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 RNU6-1170P-201ENST00000515974 106 ntBASIC6.55□□□□□ -1.36
NID1P14543 RNU6-1308P-201ENST00000516817 103 ntBASIC6.55□□□□□ -1.36
NID1P14543 RNU7-30P-201ENST00000516835 62 ntBASIC6.55□□□□□ -1.36
NID1P14543 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.55□□□□□ -1.36
NID1P14543 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 OR5M4P-201ENST00000529436 925 ntBASIC6.55□□□□□ -1.36
NID1P14543 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NID1P14543 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.55□□□□□ -1.36
NID1P14543 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.55□□□□□ -1.36
NID1P14543 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.55□□□□□ -1.36
NID1P14543 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 AC100830.2-201ENST00000581636 240 ntBASIC6.55□□□□□ -1.36
NID1P14543 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.55□□□□□ -1.36
NID1P14543 NRBF2P1-201ENST00000587407 859 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms