Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RPL35AP24-201ENST00000413846 330 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC093655.2-201ENST00000425735 631 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL158073.1-201ENST00000426848 1104 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL389925.1-201ENST00000432257 728 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RPL35AP21-201ENST00000437667 333 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RPS29P10-201ENST00000439197 166 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 GTF3AP5-201ENST00000442645 697 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RPS6P2-201ENST00000454208 705 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RN7SL174P-201ENST00000475578 289 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SIAH1P1-201ENST00000479411 923 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC108693.1-201ENST00000496068 432 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 RPS4XP20-201ENST00000505751 772 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC097173.1-201ENST00000505862 819 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AF186190.1-201ENST00000517470 480 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 IGKV3D-34-201ENST00000522638 302 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC069307.1-201ENST00000602820 447 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AP005131.7-201ENST00000610087 611 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AC118658.2-201ENST00000618697 459 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL049767.1-202ENST00000637826 242 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 SCARNA15-201ENST00000607520 4325 ntBASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RHBDD3Q9Y3P4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.46□□□□□ -1.69
RHBDD3Q9Y3P4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
RHBDD3Q9Y3P4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RHBDD3Q9Y3P4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RHBDD3Q9Y3P4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RHBDD3Q9Y3P4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 UBBP2-201ENST00000376781 231 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 RN7SKP97-201ENST00000410966 333 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 GAPDHP34-201ENST00000432112 823 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AL391987.1-201ENST00000441025 200 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 SPRYD7P1-201ENST00000443861 570 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC015864.1-201ENST00000496512 544 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 BX510359.5-201ENST00000515651 304 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 NPM1P35-201ENST00000533043 868 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC233702.9-201ENST00000581528 203 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 MIR3936-201ENST00000584304 110 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 MIR6837-201ENST00000620884 64 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 MAPK10-349ENST00000641767 3661 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC009313.2-201ENST00000417893 1941 ntBASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHBDD3Q9Y3P4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms