Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK2Q9UPX8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 RNA5SP44-201ENST00000410446 133 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 RPS17P8-201ENST00000434525 335 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 YWHAZP2-201ENST00000440317 728 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 Z95327.1-201ENST00000446082 482 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AC093840.1-201ENST00000511599 336 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 DHX9P1-201ENST00000436565 3076 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AC002525.1-201ENST00000624392 1622 ntBASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHANK2Q9UPX8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 SNORA70.4-201ENST00000365509 134 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 ARL4AP5-201ENST00000404372 599 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 RPEP3-201ENST00000425462 676 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 MRPL35P2-201ENST00000448009 511 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 RNU6-709P-201ENST00000517257 104 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 MIR3939-201ENST00000582614 106 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC005191.1-201ENST00000603950 358 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC067931.1-201ENST00000624190 671 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC093671.1-201ENST00000624981 2929 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 QRSL1P2-201ENST00000418582 964 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC006065.1-201ENST00000422539 802 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 RPL12P28-201ENST00000430852 489 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 Z95152.1-201ENST00000453556 656 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 MTND4LP2-201ENST00000502312 285 ntBASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHANK2Q9UPX8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 RNU1-82P-201ENST00000390851 165 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 NRBF2P2-201ENST00000413087 861 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 AC140479.3-201ENST00000418944 1126 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 ARL2BPP10-201ENST00000446487 531 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 RPL23AP53-201ENST00000521854 457 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 AC243960.7-201ENST00000623532 707 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 AC006453.5-201ENST00000636451 619 ntBASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
SHANK2Q9UPX8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms