Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MEMO1P4-201ENST00000453590 386 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PARP4P3-201ENST00000510265 317 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AP005131.7-201ENST00000610087 611 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC023509.5-201ENST00000617434 807 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC090337.1-201ENST00000579651 2074 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RN7SKP222-201ENST00000410651 315 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RPL21P89-201ENST00000444021 467 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RPS17P5-201ENST00000498293 408 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC244502.2-201ENST00000543361 851 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AL445647.2-201ENST00000615170 130 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC099654.3-201ENST00000447087 1546 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PEX12P1-201ENST00000400284 1048 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RN7SL601P-201ENST00000471221 293 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC092754.1-201ENST00000472975 479 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TMED11P-201ENST00000479478 690 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 GTF2IP22-201ENST00000554443 182 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 FAM27B-201ENST00000610601 213 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC005618.1-201ENST00000606901 3148 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 Z95327.2-201ENST00000414579 1873 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AL356387.2-201ENST00000422272 243 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 FTH1P16-201ENST00000435241 552 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AL157394.1-201ENST00000562983 1224 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AC013488.1-201ENST00000526618 1838 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AC005183.1-201ENST00000603687 1979 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 OR1F12-201ENST00000402365 945 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 COX6B1P7-201ENST00000430845 235 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AL731534.1-201ENST00000434711 269 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AC124916.1-201ENST00000444020 547 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 MTND4LP2-201ENST00000502312 285 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 MIR4769-201ENST00000584126 77 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 RIOK3P1-201ENST00000418778 1528 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AC093297.3-201ENST00000607056 2517 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 AC023632.6-201ENST00000624338 2177 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 OR13K1P-201ENST00000444577 975 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.92□□□□□ -2.1
MACF1Q9UPN3 RNU1-95P-201ENST00000516357 160 ntBASIC1.92□□□□□ -2.1
MACF1Q9UPN3 RNU1-128P-201ENST00000516704 160 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms