Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 SNORA74A-201ENST00000364089 198 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC009506.2-201ENST00000420635 840 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 RPL12P3-201ENST00000440080 396 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 MTND2P30-201ENST00000456663 382 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 RPS17P2-201ENST00000461663 408 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 RN7SL97P-201ENST00000486780 299 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC138409.2-202ENST00000507274 458 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 HMGN1P15-201ENST00000513870 295 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 OR1F2P-201ENST00000570470 933 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC126365.2-201ENST00000580630 379 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 MIR4646-201ENST00000580775 63 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AP003117.1-201ENST00000602771 554 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AL671309.1-201ENST00000603750 544 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC018695.5-201ENST00000605872 315 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC110792.4-201ENST00000609843 298 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AC112694.2-201ENST00000623697 768 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 CASC19-222ENST00000641321 1173 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 INTS6P1-201ENST00000504674 2530 ntBASIC5.4□□□□□ -1.55
SIX4Q9UIU6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.4□□□□□ -1.55
SIX4Q9UIU6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 RNU4-39P-201ENST00000362455 127 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SNORA27.3-201ENST00000364937 134 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SNORA51.8-201ENST00000384234 132 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SNORA70.10-201ENST00000384515 134 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 LRRC37BP1-201ENST00000398851 714 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 CCNB2P1-201ENST00000399411 1150 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 MTND4LP21-201ENST00000415303 295 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AF186996.5-201ENST00000418098 904 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 RPL7P11-201ENST00000437586 658 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 RPL5P25-201ENST00000441148 775 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AL691482.1-201ENST00000453255 87 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 EIF2S2P4-201ENST00000461070 984 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC008033.2-201ENST00000542626 177 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 EIF1P5-201ENST00000585002 234 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 BNIP3P27-201ENST00000599991 412 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC005377.1-201ENST00000605126 456 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 LINC00216-201ENST00000623548 1126 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 AL136520.1-201ENST00000600311 1322 ntBASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX4Q9UIU6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL645733.1-201ENST00000402250 217 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms