Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 BGLT3-201ENST00000564523 994 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 MIR4737-201ENST00000583979 81 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC007618.1-201ENST00000366455 732 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 SNORA70.10-201ENST00000384515 134 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 CASKP1-201ENST00000412870 582 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 RPL12P9-201ENST00000412942 488 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AL049745.1-201ENST00000433953 286 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 Z80107.2-201ENST00000445127 392 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 CBX1P2-201ENST00000453841 458 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 NDUFB4P11-201ENST00000560510 395 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AL031320.1-201ENST00000604177 357 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AP001521.2-201ENST00000608772 546 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC073869.7-201ENST00000640874 297 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC092111.2-201ENST00000611627 1414 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 AC132825.1-201ENST00000463573 2247 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 LINC01355-201ENST00000566551 5444 ntBASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCF1Q9UBD9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 Y_RNA.62-201ENST00000362840 99 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 GAPDHP15-201ENST00000398586 975 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 HMGB3P7-201ENST00000400214 611 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 RPL37P18-201ENST00000411602 243 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC096644.3-201ENST00000416788 338 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC007559.1-201ENST00000428736 355 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC008072.1-201ENST00000434254 824 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 HMGB1P4-201ENST00000455362 567 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 IGLV2-34-201ENST00000490007 283 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CCNHP1-201ENST00000513311 678 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC138832.1-201ENST00000522871 556 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 TVP23CP2-201ENST00000571473 623 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 PRPF19P1-201ENST00000584766 898 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC018695.5-201ENST00000605872 315 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 AC026367.3-201ENST00000619032 590 ntBASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCF1Q9UBD9 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms