Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 GOT2P5-201ENST00000433995 546 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC099670.2-201ENST00000435130 321 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC006326.1-201ENST00000445465 787 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC092709.1-201ENST00000521355 1045 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CHD7Q9P2D1 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AL672167.2-201ENST00000377164 879 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC091953.5-201ENST00000622919 233 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 RPL12P9-201ENST00000412942 488 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 RPL37P1-201ENST00000432310 284 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC006499.6-201ENST00000511169 607 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC091979.2-201ENST00000607514 214 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 LCOR-201ENST00000286067 4542 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 RNA5SP119-201ENST00000362715 117 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 RNU6-525P-201ENST00000363685 104 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC091390.3-201ENST00000426478 338 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 NDUFA5P1-201ENST00000433858 341 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 SCARNA13-201ENST00000516672 275 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC136777.2-201ENST00000522979 358 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 OR4A2P-201ENST00000527276 913 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AC090515.3-201ENST00000560431 315 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AP001267.4-201ENST00000602598 545 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 AL162574.1-201ENST00000615702 950 ntBASIC4.83□□□□□ -1.64
CHD7Q9P2D1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD7Q9P2D1 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 SNORA62.3-201ENST00000365110 153 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 RNU6-628P-201ENST00000410675 107 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 VN1R37P-201ENST00000419096 748 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 COX6CP13-201ENST00000428703 226 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 RPL5P32-201ENST00000454085 879 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 PGBD4P4-201ENST00000509673 613 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 SNORA74D-201ENST00000516404 141 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 RNA5SP49-201ENST00000516450 115 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 AC018644.1-201ENST00000429934 551 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 AL353748.1-201ENST00000440753 474 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 AL132838.2-201ENST00000492041 314 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 MIR4286-201ENST00000580651 93 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 MIR6875-201ENST00000617506 72 ntBASIC4.82□□□□□ -1.64
CHD7Q9P2D1 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD7Q9P2D1 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms