Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 RN7SL517P-201ENST00000462240 305 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 MIR4271-201ENST00000582451 67 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 MIR4310-201ENST00000582950 57 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC087783.2-201ENST00000605070 562 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC234782.5-201ENST00000617723 324 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC079298.2-201ENST00000623885 459 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NDE1Q9NXR1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 MIR323B-201ENST00000385269 82 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AL662874.1-201ENST00000426065 230 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 DSTNP5-201ENST00000427921 523 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 FMO7P-201ENST00000436045 768 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AL445665.1-202ENST00000452436 324 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 RN7SL51P-201ENST00000468230 285 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC025181.1-201ENST00000477507 416 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 STMN1P2-201ENST00000508435 439 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC068305.2-201ENST00000550567 1205 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 BLZF2P-201ENST00000553776 1130 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC005972.3-201ENST00000606304 481 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 AC015802.5-201ENST00000607478 399 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 LINC01109-201ENST00000603837 3081 ntBASIC4.83□□□□□ -1.64
NDE1Q9NXR1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.83□□□□□ -1.64
NDE1Q9NXR1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC008549.2-201ENST00000333482 706 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RNA5SP46-201ENST00000362370 120 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RNU6-152P-201ENST00000384037 107 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 SEPT7P8-201ENST00000413308 775 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 QRSL1P2-201ENST00000418582 964 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RPL12P43-201ENST00000420608 499 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RCC2P2-201ENST00000422174 918 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AL034379.1-201ENST00000423216 253 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AL590623.1-201ENST00000427864 105 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RPS27P18-201ENST00000431701 247 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AL590762.3-201ENST00000436372 640 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 TIMM8BP2-201ENST00000445940 251 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 EIF2S2P5-201ENST00000457635 968 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RN7SL558P-201ENST00000497468 299 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms