Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 AC125238.2-201ENST00000430003 1440 ntBASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 AC027279.1-201ENST00000568885 4284 ntBASIC6.76□□□□□ -1.33
SHKBP1Q8TBC3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 MIR365B-201ENST00000362317 111 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RNU6-697P-201ENST00000363348 107 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 SNORA63-201ENST00000363450 132 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 snoZ40.1-201ENST00000364540 72 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RNA5SP122-201ENST00000384457 108 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 MT-TL1-201ENST00000386347 75 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RNU6-876P-201ENST00000391295 104 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RPS7P13-201ENST00000413955 498 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RPL21P32-201ENST00000419877 477 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC094019.1-201ENST00000434678 472 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC073614.1-201ENST00000438690 650 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 EMC3-AS1-205ENST00000438698 534 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AL672167.3-201ENST00000465951 960 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RPL7P18-201ENST00000478965 734 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC117395.1-201ENST00000487390 403 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 RN7SL561P-201ENST00000488553 281 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 MTCYBP18-201ENST00000501056 747 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC093824.1-201ENST00000508796 343 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 SMARCE1P4-201ENST00000523647 241 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AP004609.2-201ENST00000532177 190 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC027667.1-201ENST00000545814 304 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC092375.1-201ENST00000550410 637 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC091489.2-201ENST00000566263 604 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC090286.3-201ENST00000573133 187 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 UBE2V2P2-201ENST00000587677 504 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AP000860.1-201ENST00000605250 559 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC012414.7-202ENST00000622705 1090 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC022400.9-201ENST00000623633 273 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AC025048.6-202ENST00000627667 438 ntBASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHKBP1Q8TBC3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 TTC39DP-201ENST00000416781 1688 ntBASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 OR10J6P-201ENST00000289731 930 ntBASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 RN7SKP275-201ENST00000364626 301 ntBASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 RN7SKP108-201ENST00000411367 328 ntBASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 XKRYP4-201ENST00000414395 483 ntBASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 AC013429.2-201ENST00000418798 781 ntBASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.74□□□□□ -1.33
SHKBP1Q8TBC3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms