Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 XKRYP5-201ENST00000449659 483 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC004129.2-201ENST00000457229 287 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 RPL5P13-201ENST00000462840 709 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 RPS23P7-201ENST00000466210 444 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 RPL23AP40-201ENST00000487630 390 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC073610.1-201ENST00000489971 396 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 IGLV2-34-201ENST00000490007 283 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC010627.1-201ENST00000503819 1294 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 OR5AN2P-201ENST00000534535 896 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 NIFKP6-201ENST00000598115 845 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AC095055.1-201ENST00000603472 1113 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 AL160237.3-201ENST00000604114 1013 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 VN1R9P-201ENST00000614184 867 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 RMST_10.1-201ENST00000616309 154 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 IMMTP1-201ENST00000435590 2219 ntBASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SMC1BQ8NDV3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AL034546.1-201ENST00000623740 3693 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 NPM1P40-201ENST00000412758 733 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 PTCD2P2-201ENST00000415579 1095 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AL133482.1-201ENST00000415988 498 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 VPS26BP1-201ENST00000417155 755 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AL157827.1-201ENST00000447622 132 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 CYCSP42-201ENST00000450823 238 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 RN7SL354P-201ENST00000469282 294 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 LARP7P4-201ENST00000481075 878 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 CCDC11P1-201ENST00000503137 1162 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 RNU6-311P-201ENST00000516224 102 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 IGHV1-14-201ENST00000523391 241 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC069307.1-201ENST00000602820 447 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 Z82195.1-201ENST00000604558 398 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC073387.2-201ENST00000604797 784 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC067838.1-201ENST00000606064 577 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC003992.1-201ENST00000635364 557 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AC011504.1-201ENST00000623331 4103 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMC1BQ8NDV3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SMC1BQ8NDV3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
SMC1BQ8NDV3 AC083837.1-201ENST00000565297 2994 ntBASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 AC068538.1-201ENST00000376856 336 ntBASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 CYP4F29P-201ENST00000420685 446 ntBASIC6.71□□□□□ -1.34
SMC1BQ8NDV3 AC093655.2-201ENST00000425735 631 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms