Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 RNA5SP183-201ENST00000362452 119 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 SNORA17.1-201ENST00000362945 126 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 U3.2-201ENST00000362981 210 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 SNORA73.1-201ENST00000363107 205 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 MIR143-201ENST00000385300 106 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 LRRC37BP1-201ENST00000398851 714 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 DUTP5-201ENST00000406790 469 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 NPM1P4-201ENST00000414095 812 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AL121776.1-201ENST00000429337 372 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 OR6C71P-201ENST00000432580 913 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 HMGB1P4-201ENST00000455362 567 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 TRBV8-1-201ENST00000481590 279 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC020890.1-201ENST00000491837 504 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 RNU6-943P-201ENST00000516960 98 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC012339.2-201ENST00000523996 453 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC116553.2-201ENST00000564203 463 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 ADAM3B-201ENST00000569937 840 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 uc_338.18-201ENST00000615451 175 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 LINC01109-201ENST00000603837 3081 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 SALL4P2-201ENST00000423288 2910 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 PANDAR-201ENST00000629595 1506 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 MTCO1P22-201ENST00000604619 1360 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 RNA5SP28-201ENST00000363841 119 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC009237.10-201ENST00000414112 510 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 QRSL1P2-201ENST00000418582 964 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AL589765.3-201ENST00000446084 462 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC104849.1-201ENST00000462623 405 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC108751.2-201ENST00000469993 231 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 IGKV3D-34-201ENST00000522638 302 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC005868.1-201ENST00000536421 331 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC125612.1-201ENST00000547580 377 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 AC095055.1-201ENST00000603472 1113 ntBASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC50Q8IVM0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC50Q8IVM0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC50Q8IVM0 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.21□□□□□ -1.57
CCDC50Q8IVM0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RN7SKP162-201ENST00000363605 345 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RN7SKP160-201ENST00000363804 340 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 LAP3P1-201ENST00000403648 294 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AP000580.1-201ENST00000404439 358 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL121834.1-202ENST00000404494 277 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RPL21P108-201ENST00000413857 481 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RPS29P9-201ENST00000440360 171 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL450023.3-201ENST00000440592 271 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL354714.3-201ENST00000447284 493 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RN7SL799P-201ENST00000475891 298 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RN7SKP260-201ENST00000516907 149 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms