Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 MAPK10-371ENST00000641952 5209 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 RNA5SP119-201ENST00000362715 117 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 MIR3065-201ENST00000390137 79 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 AC022336.1-201ENST00000475510 337 ntBASIC3.78□□□□□ -1.8
VPS13CQ709C8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS13CQ709C8 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS13CQ709C8 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
VPS13CQ709C8 FTX-215ENST00000638681 9771 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 TMSB10P2-201ENST00000416049 131 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 NFYAP1-201ENST00000431953 972 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 MRPS21P3-201ENST00000436696 262 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL157884.3-201ENST00000448273 1184 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC016550.3-201ENST00000515706 767 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 MIR634-201ENST00000385208 97 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 LINC00993-201ENST00000420453 540 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC090142.1-201ENST00000465776 462 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 SOD1P3-201ENST00000518682 454 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC090515.3-201ENST00000560431 315 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 VN1R92P-201ENST00000598511 928 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 RNU4-89P-201ENST00000607443 133 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC012409.3-201ENST00000611343 981 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL590065.1-201ENST00000603371 4774 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 MIR383-201ENST00000362257 73 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AP000580.1-201ENST00000404439 358 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 RNA5SP36-201ENST00000410197 133 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 RPL7AP49-201ENST00000429522 581 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AL591438.1-201ENST00000433508 581 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC093249.4-201ENST00000564755 259 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC020634.1-201ENST00000608701 549 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC007786.3-201ENST00000615154 596 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 AC093829.1-201ENST00000506662 1618 ntBASIC3.77□□□□□ -1.81
VPS13CQ709C8 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS13CQ709C8 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VPS13CQ709C8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ADAM5-202ENST00000399789 1942 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC092681.1-201ENST00000297369 291 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 AL672167.2-201ENST00000377164 879 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC021193.1-201ENST00000511607 420 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms