Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC079741.1-201ENST00000321498 212 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 RNU6-1251P-201ENST00000364502 107 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AL021331.1-201ENST00000402817 582 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 SNORA79B-201ENST00000410557 148 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC012497.1-201ENST00000429392 575 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC068287.1-201ENST00000430283 295 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 ZFAND6P1-201ENST00000434138 605 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 MTCO3P43-201ENST00000440974 771 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 RPL5P25-201ENST00000441148 775 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 COL6A4P2-205ENST00000509855 506 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 IGKV1-32-201ENST00000519290 311 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 GCSHP4-201ENST00000538792 439 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC009237.13-201ENST00000603193 276 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 MIR7703-201ENST00000620784 77 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AL034549.2-201ENST00000618285 3373 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 AC079298.1-201ENST00000625026 1619 ntBASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD4Q5XG99 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AL359955.1-201ENST00000455242 3275 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 RN7SKP153-201ENST00000365026 316 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 RNU6-729P-201ENST00000384399 107 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 U3.28-201ENST00000391249 210 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC092570.3-201ENST00000420113 693 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 MTATP6P11-201ENST00000428071 670 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 RN7SL189P-201ENST00000468631 289 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 RWDD4P1-201ENST00000488019 565 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 GAPDHP56-201ENST00000506031 988 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC125494.2-201ENST00000602431 657 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AL136370.1-201ENST00000608166 691 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AL139124.1-201ENST00000609123 421 ntBASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LYSMD4Q5XG99 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms