Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL353692.2-201ENST00000407054 335 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 SNORA11B-201ENST00000408175 129 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.11□□□□□ -1.59
CDK3Q00526 DDX39BP1-205ENST00000422507 192 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 NPM1P22-201ENST00000427761 952 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC092647.3-201ENST00000443044 633 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 AC108161.1-201ENST00000461060 402 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 RN7SL826P-201ENST00000479724 288 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK3Q00526 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 RN7SKP147-201ENST00000517154 244 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC087888.1-201ENST00000550884 1254 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC135178.6-201ENST00000605314 398 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK3Q00526 AC090510.2-201ENST00000617465 629 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 RNA5SP439-201ENST00000617595 124 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 MIR6839-201ENST00000620425 113 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 AP002371.2-201ENST00000624450 503 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK3Q00526 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK3Q00526 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CDK3Q00526 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK3Q00526 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK3Q00526 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK3Q00526 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK3Q00526 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK3Q00526 CASC19-281ENST00000642118 1554 ntBASIC5.11□□□□□ -1.59
CDK3Q00526 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK3Q00526 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDK3Q00526 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK3Q00526 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK3Q00526 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDK3Q00526 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDK3Q00526 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDK3Q00526 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 RNU6-31P-201ENST00000384388 108 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDK3Q00526 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.1□□□□□ -1.59
CDK3Q00526 RN7SKP114-201ENST00000410327 279 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK3Q00526 NPM1P18-201ENST00000434232 732 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 SUMO2P1-206ENST00000445436 284 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK3Q00526 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK3Q00526 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK3Q00526 AC097173.1-201ENST00000505862 819 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AC010468.3-201ENST00000508225 458 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 RN7SKP260-201ENST00000516907 149 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AC103833.1-201ENST00000517442 172 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK3Q00526 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDK3Q00526 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK3Q00526 AC015849.2-201ENST00000605738 409 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AC004775.1-201ENST00000607389 753 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AL135786.2-201ENST00000608422 615 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK3Q00526 AL133445.2-201ENST00000611191 527 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 AL445493.3-201ENST00000619568 477 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AL442128.2-201ENST00000620246 1824 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK3Q00526 CASC19-260ENST00000641828 2001 ntBASIC5.1□□□□□ -1.59
CDK3Q00526 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDK3Q00526 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK3Q00526 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK3Q00526 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDK3Q00526 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
CDK3Q00526 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK3Q00526 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDK3Q00526 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK3Q00526 NXF4-202ENST00000416098 1465 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK3Q00526 RNU4-7P-201ENST00000364758 141 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms