Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.35□□□□□ -1.71
UBA52P62987 AC024940.3-201ENST00000538551 316 ntBASIC4.35□□□□□ -1.71
UBA52P62987 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 AC092490.3-201ENST00000545370 572 ntBASIC4.35□□□□□ -1.71
UBA52P62987 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.35□□□□□ -1.71
UBA52P62987 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.35□□□□□ -1.71
UBA52P62987 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 AC095055.1-201ENST00000603472 1113 ntBASIC4.35□□□□□ -1.71
UBA52P62987 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 AC090527.3-201ENST00000619041 548 ntBASIC4.35□□□□□ -1.71
UBA52P62987 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 OR51H2P-202ENST00000641424 3046 ntBASIC4.35□□□□□ -1.71
UBA52P62987 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBA52P62987 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.35□□□□□ -1.71
UBA52P62987 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 RNU1-94P-201ENST00000362627 173 ntBASIC4.34□□□□□ -1.71
UBA52P62987 RNU4-4P-201ENST00000364588 130 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AP000580.1-201ENST00000404439 358 ntBASIC4.34□□□□□ -1.71
UBA52P62987 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.34□□□□□ -1.71
UBA52P62987 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
UBA52P62987 RN7SKP247-201ENST00000411094 308 ntBASIC4.34□□□□□ -1.71
UBA52P62987 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 GTF2IP2-201ENST00000424290 697 ntBASIC4.34□□□□□ -1.71
UBA52P62987 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBA52P62987 RBMY2QP-201ENST00000429799 1147 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.34□□□□□ -1.71
UBA52P62987 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 AL672138.1-201ENST00000450604 1015 ntBASIC4.34□□□□□ -1.71
UBA52P62987 BX842559.2-201ENST00000451418 605 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AL356981.1-201ENST00000454879 684 ntBASIC4.34□□□□□ -1.71
UBA52P62987 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 RPL7P6-201ENST00000480903 738 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AC083982.1-201ENST00000485679 344 ntBASIC4.34□□□□□ -1.71
UBA52P62987 RPL7P41-201ENST00000485823 957 ntBASIC4.34□□□□□ -1.71
UBA52P62987 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.34□□□□□ -1.71
UBA52P62987 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.34□□□□□ -1.71
UBA52P62987 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.34□□□□□ -1.71
UBA52P62987 AGGF1P9-201ENST00000561884 913 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.34□□□□□ -1.71
UBA52P62987 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 AP000769.2-201ENST00000602344 396 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.34□□□□□ -1.71
UBA52P62987 AC009027.1-201ENST00000604510 479 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 uc_338.18-201ENST00000615451 175 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AC079298.2-201ENST00000623885 459 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AP003400.3-201ENST00000624904 346 ntBASIC4.34□□□□□ -1.71
UBA52P62987 AL353662.3-201ENST00000625131 237 ntBASIC4.34□□□□□ -1.71
UBA52P62987 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
UBA52P62987 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
UBA52P62987 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
UBA52P62987 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.34□□□□□ -1.72
UBA52P62987 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
UBA52P62987 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
UBA52P62987 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBA52P62987 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBA52P62987 AL035419.1-201ENST00000397037 564 ntBASIC4.33□□□□□ -1.72
UBA52P62987 CHMP1B2P-201ENST00000399581 597 ntBASIC4.33□□□□□ -1.72
UBA52P62987 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 RN7SKP126-201ENST00000411143 300 ntBASIC4.33□□□□□ -1.72
UBA52P62987 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.33□□□□□ -1.72
UBA52P62987 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms