Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN20P56880 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 AL360270.2-201ENST00000562952 5985 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 AC068870.3-201ENST00000625077 2536 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN20P56880 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 CDC27P2-201ENST00000425026 1922 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 AC107021.2-201ENST00000567714 2095 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 SNORA72.3-201ENST00000365074 132 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 RNU6-1263P-201ENST00000384601 106 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 RNU1-77P-201ENST00000390868 162 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 RNU6-1000P-201ENST00000391066 106 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 RNA5SP241-201ENST00000391326 114 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 NPM1P4-201ENST00000414095 812 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC234781.4-201ENST00000419384 244 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 HSPE1P16-201ENST00000426640 348 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 RPL7P56-201ENST00000429441 717 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 CFL1P1-202ENST00000432948 411 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 CYCSP12-201ENST00000437729 300 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN20P56880 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 SPRYD7P1-201ENST00000443861 570 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC023512.1-201ENST00000444513 499 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 RPS26P39-201ENST00000469206 341 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN20P56880 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN20P56880 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN20P56880 GLRXP2-201ENST00000555594 321 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC040958.1-201ENST00000561102 201 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC007225.2-201ENST00000562529 256 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 EIF1P5-201ENST00000585002 234 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AP002884.5-201ENST00000595053 1132 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC084373.1-201ENST00000603311 235 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AL158050.2-201ENST00000605336 568 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AC026979.4-201ENST00000606555 645 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AP005229.2-201ENST00000609980 697 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.94□□□□□ -1.62
CLDN20P56880 AC091932.2-201ENST00000623014 291 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN20P56880 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CLDN20P56880 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLDN20P56880 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN20P56880 AC104623.2-202ENST00000623477 4002 ntBASIC4.94□□□□□ -1.62
CLDN20P56880 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN20P56880 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 AC093849.1-201ENST00000563631 2209 ntBASIC4.93□□□□□ -1.62
CLDN20P56880 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLDN20P56880 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN20P56880 MT-TP-201ENST00000387461 68 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms