Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 DDX18P5-201ENST00000534547 1306 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 RN7SKP160-201ENST00000363804 340 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PKNOX1P55347 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 BMS1P3-201ENST00000372011 932 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AL136116.2-201ENST00000404020 785 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 CKS1BP6-201ENST00000424932 240 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 OR52B5P-201ENST00000435337 951 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 ARAFP2-201ENST00000440565 559 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 OR7E125P-201ENST00000443450 846 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 MRPL48P1-201ENST00000445390 636 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 TCEA1P1-201ENST00000449716 880 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 IGHV5-78-201ENST00000450948 295 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 CYCSP34-201ENST00000458172 304 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC108751.2-201ENST00000469993 231 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC097484.1-201ENST00000471148 389 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC024558.1-201ENST00000505008 528 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AL358913.1-201ENST00000554342 121 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.82□□□□□ -1.64
PKNOX1P55347 RNF138P2-201ENST00000603490 592 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 TAS2R6P-201ENST00000605022 826 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 NF1P10-201ENST00000613227 742 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 OR52B5P-202ENST00000641118 1110 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKNOX1P55347 AC027228.2-201ENST00000567141 2154 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKNOX1P55347 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
PKNOX1P55347 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKNOX1P55347 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKNOX1P55347 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKNOX1P55347 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PKNOX1P55347 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKNOX1P55347 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
PKNOX1P55347 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 SNORA66-201ENST00000384792 133 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 MIR137-201ENST00000385223 102 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AL592291.1-201ENST00000403830 352 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 RPL35AP24-201ENST00000413846 330 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 NPM1P4-201ENST00000414095 812 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 FABP7P2-201ENST00000429946 379 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 RAB9AP5-201ENST00000437794 597 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 RAB9AP2-201ENST00000443911 597 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 SETP20-201ENST00000457046 852 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 MTCYBP14-201ENST00000457471 715 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.81□□□□□ -1.64
PKNOX1P55347 RPL7P51-201ENST00000490532 749 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 SNORD116-30-201ENST00000516468 85 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 IGKV2-18-201ENST00000522607 343 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC233702.9-201ENST00000581528 203 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 AC105254.2-201ENST00000603636 436 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 IMMP1LP3-201ENST00000604197 224 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 AL049767.1-202ENST00000637826 242 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.81□□□□□ -1.64
PKNOX1P55347 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PKNOX1P55347 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
PKNOX1P55347 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PKNOX1P55347 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKNOX1P55347 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PKNOX1P55347 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKNOX1P55347 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PKNOX1P55347 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AL034370.1-201ENST00000397254 1590 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms