Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 SNURFL-201ENST00000309296 343 ntBASIC5.54□□□□□ -1.52
VCPP55072 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 AL672167.2-201ENST00000377164 879 ntBASIC5.54□□□□□ -1.52
VCPP55072 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 COX5BP7-201ENST00000414780 274 ntBASIC5.54□□□□□ -1.52
VCPP55072 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 AC068287.1-201ENST00000430283 295 ntBASIC5.54□□□□□ -1.52
VCPP55072 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 AC092647.2-201ENST00000452998 253 ntBASIC5.54□□□□□ -1.52
VCPP55072 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.54□□□□□ -1.52
VCPP55072 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
VCPP55072 AL049874.2-201ENST00000492636 288 ntBASIC5.54□□□□□ -1.52
VCPP55072 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 AC022360.1-201ENST00000521058 340 ntBASIC5.54□□□□□ -1.52
VCPP55072 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 EDDM3DP-201ENST00000554692 434 ntBASIC5.54□□□□□ -1.52
VCPP55072 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.54□□□□□ -1.52
VCPP55072 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 AC005341.1-201ENST00000571086 708 ntBASIC5.54□□□□□ -1.52
VCPP55072 TVP23CP2-201ENST00000571473 623 ntBASIC5.54□□□□□ -1.52
VCPP55072 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.54□□□□□ -1.52
VCPP55072 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.54□□□□□ -1.52
VCPP55072 AL392048.1-201ENST00000613946 534 ntBASIC5.54□□□□□ -1.52
VCPP55072 MIR6839-201ENST00000620425 113 ntBASIC5.54□□□□□ -1.52
VCPP55072 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VCPP55072 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.54□□□□□ -1.52
VCPP55072 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VCPP55072 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.54□□□□□ -1.52
VCPP55072 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VCPP55072 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VCPP55072 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VCPP55072 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.53□□□□□ -1.52
VCPP55072 AL034549.2-201ENST00000618285 3373 ntBASIC5.53□□□□□ -1.52
VCPP55072 AC007618.1-201ENST00000366455 732 ntBASIC5.53□□□□□ -1.52
VCPP55072 GLULP6-201ENST00000399502 913 ntBASIC5.53□□□□□ -1.52
VCPP55072 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.53□□□□□ -1.52
VCPP55072 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
VCPP55072 AC119751.6-201ENST00000416712 186 ntBASIC5.53□□□□□ -1.52
VCPP55072 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.53□□□□□ -1.52
VCPP55072 AC073264.2-201ENST00000448886 166 ntBASIC5.53□□□□□ -1.52
VCPP55072 AC058823.1-201ENST00000485315 474 ntBASIC5.53□□□□□ -1.52
VCPP55072 RNA5SP373-201ENST00000517271 95 ntBASIC5.53□□□□□ -1.52
VCPP55072 FTH1P11-201ENST00000517577 551 ntBASIC5.53□□□□□ -1.52
VCPP55072 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 AC034205.1-201ENST00000520621 638 ntBASIC5.53□□□□□ -1.52
VCPP55072 AP006289.1-201ENST00000538089 277 ntBASIC5.53□□□□□ -1.52
VCPP55072 AC024940.3-201ENST00000538551 316 ntBASIC5.53□□□□□ -1.52
VCPP55072 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.53□□□□□ -1.52
VCPP55072 AC008147.3-201ENST00000548666 354 ntBASIC5.53□□□□□ -1.52
VCPP55072 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.53□□□□□ -1.52
VCPP55072 BNIP3P22-201ENST00000593399 556 ntBASIC5.53□□□□□ -1.52
VCPP55072 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 AC087821.1-201ENST00000623639 567 ntBASIC5.53□□□□□ -1.52
VCPP55072 SYT14P1-202ENST00000600441 1448 ntBASIC5.53□□□□□ -1.52
VCPP55072 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VCPP55072 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VCPP55072 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VCPP55072 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
VCPP55072 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.53□□□□□ -1.52
VCPP55072 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VCPP55072 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.53□□□□□ -1.52
VCPP55072 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VCPP55072 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VCPP55072 RNA5SP296-201ENST00000410523 111 ntBASIC5.52□□□□□ -1.53
VCPP55072 GJA6P-201ENST00000415117 1042 ntBASIC5.52□□□□□ -1.53
VCPP55072 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.52□□□□□ -1.53
VCPP55072 GAPDHP25-201ENST00000447061 1001 ntBASIC5.52□□□□□ -1.53
VCPP55072 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.52□□□□□ -1.53
VCPP55072 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 AP002371.1-201ENST00000463604 433 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms