Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR4443-201ENST00000585052 53 ntBASIC5.8□□□□□ -1.48
COPB1P53618 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.8□□□□□ -1.48
COPB1P53618 AC027243.2-201ENST00000602530 724 ntBASIC5.8□□□□□ -1.48
COPB1P53618 AL096803.3-201ENST00000609032 532 ntBASIC5.8□□□□□ -1.48
COPB1P53618 DUXAP10-204ENST00000612052 616 ntBASIC5.8□□□□□ -1.48
COPB1P53618 AC084824.4-201ENST00000620106 731 ntBASIC5.8□□□□□ -1.48
COPB1P53618 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.8□□□□□ -1.48
COPB1P53618 AC136428.4-201ENST00000634254 1155 ntBASIC5.8□□□□□ -1.48
COPB1P53618 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.8□□□□□ -1.48
COPB1P53618 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.8□□□□□ -1.48
COPB1P53618 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.8□□□□□ -1.48
COPB1P53618 MAPK10-338ENST00000641647 3362 ntBASIC5.8□□□□□ -1.48
COPB1P53618 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPB1P53618 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COPB1P53618 AC112198.2-201ENST00000426589 6996 ntBASIC5.8□□□□□ -1.48
COPB1P53618 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPB1P53618 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPB1P53618 AC104623.2-202ENST00000623477 4002 ntBASIC5.8□□□□□ -1.48
COPB1P53618 AC068870.3-201ENST00000625077 2536 ntBASIC5.8□□□□□ -1.48
COPB1P53618 AL031595.2-201ENST00000624215 19071 ntBASIC5.79□□□□□ -1.48
COPB1P53618 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPB1P53618 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPB1P53618 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPB1P53618 AC005294.1-201ENST00000355509 281 ntBASIC5.79□□□□□ -1.48
COPB1P53618 PEX12P1-201ENST00000400284 1048 ntBASIC5.79□□□□□ -1.48
COPB1P53618 NACAP7-201ENST00000407371 609 ntBASIC5.79□□□□□ -1.48
COPB1P53618 RN7SKP286-201ENST00000410894 299 ntBASIC5.79□□□□□ -1.48
COPB1P53618 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
COPB1P53618 PCNPP4-201ENST00000414817 517 ntBASIC5.79□□□□□ -1.48
COPB1P53618 RAB9AP4-201ENST00000415230 609 ntBASIC5.79□□□□□ -1.48
COPB1P53618 Z93019.1-201ENST00000416450 973 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.79□□□□□ -1.48
COPB1P53618 AL606495.1-201ENST00000422100 813 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.79□□□□□ -1.48
COPB1P53618 GAPDHP25-201ENST00000447061 1001 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.79□□□□□ -1.48
COPB1P53618 AC079168.1-201ENST00000458741 345 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AC104164.3-201ENST00000467363 1258 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AC093770.1-201ENST00000511559 571 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AC016550.3-201ENST00000515706 767 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.79□□□□□ -1.48
COPB1P53618 AC067904.2-201ENST00000517322 1283 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AC139103.1-201ENST00000534696 1030 ntBASIC5.79□□□□□ -1.48
COPB1P53618 YWHABP2-201ENST00000540201 713 ntBASIC5.79□□□□□ -1.48
COPB1P53618 AC008147.3-201ENST00000548666 354 ntBASIC5.79□□□□□ -1.48
COPB1P53618 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPB1P53618 AC007225.2-201ENST00000562529 256 ntBASIC5.79□□□□□ -1.48
COPB1P53618 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.79□□□□□ -1.48
COPB1P53618 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.79□□□□□ -1.48
COPB1P53618 AL445435.1-201ENST00000604232 665 ntBASIC5.79□□□□□ -1.48
COPB1P53618 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.79□□□□□ -1.48
COPB1P53618 AL049767.1-202ENST00000637826 242 ntBASIC5.79□□□□□ -1.48
COPB1P53618 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
COPB1P53618 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPB1P53618 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPB1P53618 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COPB1P53618 AC006210.2-201ENST00000367074 1545 ntBASIC5.79□□□□□ -1.48
COPB1P53618 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.79□□□□□ -1.48
COPB1P53618 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COPB1P53618 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 TCP1P3-201ENST00000414406 1498 ntBASIC5.78□□□□□ -1.48
COPB1P53618 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 MIR133B-201ENST00000362210 119 ntBASIC5.78□□□□□ -1.48
COPB1P53618 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 RNU4-27P-201ENST00000410889 139 ntBASIC5.78□□□□□ -1.48
COPB1P53618 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 SDHDP6-201ENST00000414693 480 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.78□□□□□ -1.48
COPB1P53618 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.78□□□□□ -1.48
COPB1P53618 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.78□□□□□ -1.48
COPB1P53618 AL606490.7-201ENST00000433136 191 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.78□□□□□ -1.48
COPB1P53618 LYPLA1P1-201ENST00000434514 622 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC002504.1-201ENST00000438281 691 ntBASIC5.78□□□□□ -1.48
COPB1P53618 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.78□□□□□ -1.48
COPB1P53618 RNFT1P2-201ENST00000443064 757 ntBASIC5.78□□□□□ -1.48
COPB1P53618 RAB28P3-201ENST00000448325 597 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC104634.1-201ENST00000452720 462 ntBASIC5.78□□□□□ -1.48
COPB1P53618 RN7SL717P-201ENST00000478343 297 ntBASIC5.78□□□□□ -1.48
COPB1P53618 STRADBP1-201ENST00000478954 1281 ntBASIC5.78□□□□□ -1.48
COPB1P53618 COX6B1P2-201ENST00000489624 230 ntBASIC5.78□□□□□ -1.48
COPB1P53618 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.78□□□□□ -1.48
COPB1P53618 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.78□□□□□ -1.48
COPB1P53618 RNU6-319P-201ENST00000516025 108 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.78□□□□□ -1.48
COPB1P53618 NOP56P3-201ENST00000549457 385 ntBASIC5.78□□□□□ -1.48
COPB1P53618 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPB1P53618 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.78□□□□□ -1.48
COPB1P53618 GLRXP2-201ENST00000555594 321 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.78□□□□□ -1.48
COPB1P53618 RN7SL708P-201ENST00000580952 299 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC069431.2-201ENST00000604149 1099 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC005252.1-201ENST00000604518 1063 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC009597.2-201ENST00000604659 592 ntBASIC5.78□□□□□ -1.48
COPB1P53618 AC000068.2-201ENST00000608816 460 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms