Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL670379.4-201ENST00000605279 254 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 RN7SL840P-201ENST00000606883 284 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 MIR6745-201ENST00000612694 127 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 AL136313.1-201ENST00000624804 202 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.41□□□□□ -1.06
NUBP1P53384 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.41□□□□□ -1.06
NUBP1P53384 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 XRCC6P1-201ENST00000420392 1805 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 AC239859.1-201ENST00000449715 2594 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 EDA-213ENST00000616899 4643 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 AC005077.4-201ENST00000421546 3495 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 AL008638.6-201ENST00000623947 4254 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 GABPAP-201ENST00000419271 1356 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 RRP12-201ENST00000315563 4038 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 OR10D1P-201ENST00000355343 936 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 Y_RNA.84-201ENST00000363011 104 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 RN7SKP118-201ENST00000364331 330 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 Y_RNA.237-201ENST00000364439 102 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 RNA5SP209-201ENST00000411237 97 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AC019181.1-201ENST00000417151 310 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 RPL21P38-201ENST00000418090 167 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 CYP2C56P-201ENST00000440076 291 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.4□□□□□ -1.06
NUBP1P53384 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.4□□□□□ -1.06
NUBP1P53384 RPL36AP13-201ENST00000457490 317 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 PLGLA-201ENST00000465668 449 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 AC084198.1-201ENST00000477747 402 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 AC008799.1-201ENST00000495909 457 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.4□□□□□ -1.06
NUBP1P53384 LEF1-218ENST00000512172 598 ntTSL 2 BASIC8.4□□□□□ -1.06
NUBP1P53384 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 IGLV10-67-201ENST00000519446 325 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 TMEM185AP1-201ENST00000524311 546 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC8.4□□□□□ -1.06
NUBP1P53384 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.4□□□□□ -1.06
NUBP1P53384 NUTF2P2-201ENST00000551207 384 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AC104046.1-201ENST00000559487 406 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC8.4□□□□□ -1.06
NUBP1P53384 AC005341.1-201ENST00000571086 708 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AC093826.2-201ENST00000579042 108 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AC008521.1-201ENST00000587471 187 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 AC073410.2-201ENST00000603240 332 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 PSMA6P4-201ENST00000603247 718 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AP001823.1-201ENST00000604056 1003 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 FAM27E4-201ENST00000605259 342 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 FAM27E3-202ENST00000614611 340 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 AL359547.2-201ENST00000615810 418 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 SLC20A1P2-201ENST00000618036 966 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
NUBP1P53384 TMCC1P1-201ENST00000518897 1980 ntBASIC8.4□□□□□ -1.06
NUBP1P53384 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.4□□□□□ -1.06
NUBP1P53384 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
NUBP1P53384 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
NUBP1P53384 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.4□□□□□ -1.07
NUBP1P53384 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.07
NUBP1P53384 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
NUBP1P53384 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms