Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPL7P16-201ENST00000479738 738 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCN3P51790 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN3P51790 MTND3P24-201ENST00000506306 329 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 MRPS33P2-201ENST00000507850 322 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AC008628.1-201ENST00000508663 265 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN3P51790 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN3P51790 PCNPP1-201ENST00000552501 511 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCN3P51790 NMNAT1P1-201ENST00000554095 876 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AL136520.1-202ENST00000555494 763 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AL391001.1-201ENST00000602747 715 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AL133247.2-201ENST00000603236 482 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AC005084.1-201ENST00000605160 304 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AC024933.1-201ENST00000608472 348 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AC020978.9-201ENST00000624380 1141 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 AC004656.1-201ENST00000568479 4951 ntBASIC5.6□□□□□ -1.51
CLCN3P51790 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN3P51790 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.6□□□□□ -1.51
CLCN3P51790 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN3P51790 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLCN3P51790 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN3P51790 AC093671.1-201ENST00000624981 2929 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 DDX6P1-205ENST00000441966 1436 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN3P51790 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN3P51790 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.59□□□□□ -1.51
CLCN3P51790 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLCN3P51790 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLCN3P51790 AP002530.1-201ENST00000405705 684 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AL390316.1-201ENST00000406279 553 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 RPL37P18-201ENST00000411602 243 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN3P51790 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN3P51790 MGAT2P2-201ENST00000427194 797 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AC046176.1-201ENST00000435260 1170 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 PRPF38AP2-201ENST00000438179 851 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AL691517.1-201ENST00000440833 1235 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AL354714.3-201ENST00000447284 493 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN3P51790 RNU6-889P-201ENST00000517189 103 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN3P51790 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.59□□□□□ -1.51
CLCN3P51790 GCSHP4-201ENST00000538792 439 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AC009117.1-201ENST00000563948 554 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN3P51790 AL031320.1-201ENST00000604177 357 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN3P51790 AC241377.1-201ENST00000619797 406 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AC073342.3-201ENST00000624211 193 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AP001002.2-201ENST00000625137 386 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 AL138960.2-201ENST00000625145 535 ntBASIC5.59□□□□□ -1.51
CLCN3P51790 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.59□□□□□ -1.51
CLCN3P51790 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN3P51790 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN3P51790 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN3P51790 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN3P51790 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN3P51790 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.59□□□□□ -1.52
CLCN3P51790 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.59□□□□□ -1.52
CLCN3P51790 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.59□□□□□ -1.52
CLCN3P51790 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLCN3P51790 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLCN3P51790 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCN3P51790 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCN3P51790 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLCN3P51790 MIR133A2-201ENST00000347538 102 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 SNORD51.1-201ENST00000365405 77 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 SNORD65-201ENST00000391079 73 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AL035419.1-201ENST00000397037 564 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 SNORA77-201ENST00000408716 125 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCN3P51790 AF186996.5-201ENST00000418098 904 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC073464.3-201ENST00000422564 712 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCN3P51790 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.58□□□□□ -1.52
CLCN3P51790 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCN3P51790 OR7E125P-201ENST00000443450 846 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC112498.1-201ENST00000444401 332 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 VN1R48P-201ENST00000448149 1036 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AP002345.1-201ENST00000456493 928 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC092324.1-201ENST00000468671 324 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 RN7SL319P-201ENST00000480656 221 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC090543.1-201ENST00000492168 485 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms