Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 IPO5P1-202ENST00000600039 287 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 MIR6133-201ENST00000617057 108 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.04□□□□□ -1.6
BRCA2P51587 U6.105-201ENST00000637379 88 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 LARP1BP1-201ENST00000506036 1359 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.04□□□□□ -1.6
BRCA2P51587 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.04□□□□□ -1.6
BRCA2P51587 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
BRCA2P51587 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BRCA2P51587 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.04□□□□□ -1.6
BRCA2P51587 RPL7AP49-201ENST00000429522 581 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 AL591438.1-201ENST00000433508 581 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 RPS29P7-201ENST00000439662 171 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 RPL23AP43-201ENST00000446445 471 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.04□□□□□ -1.6
BRCA2P51587 AC040958.1-201ENST00000561102 201 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.04□□□□□ -1.6
BRCA2P51587 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.04□□□□□ -1.6
BRCA2P51587 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.04□□□□□ -1.6
BRCA2P51587 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
BRCA2P51587 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.04□□□□□ -1.6
BRCA2P51587 AC090018.1-201ENST00000434369 367 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 TRMT10BP1-201ENST00000519377 943 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.04□□□□□ -1.6
BRCA2P51587 AC093249.4-201ENST00000564755 259 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 SNORA74C-1-201ENST00000580726 201 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 KC877982.1-201ENST00000602313 470 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 AC112230.1-201ENST00000604342 547 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BRCA2P51587 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BRCA2P51587 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BRCA2P51587 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.03□□□□□ -1.6
BRCA2P51587 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.03□□□□□ -1.6
BRCA2P51587 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.03□□□□□ -1.6
BRCA2P51587 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.03□□□□□ -1.6
BRCA2P51587 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.03□□□□□ -1.6
BRCA2P51587 OR7E10P-201ENST00000526420 991 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 NDUFB4P11-201ENST00000560510 395 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 EIF2AP4-201ENST00000424793 1781 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.03□□□□□ -1.6
BRCA2P51587 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 SDHCP2-201ENST00000398565 501 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 RN7SKP17-201ENST00000411242 351 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 Z92545.1-201ENST00000411782 234 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.03□□□□□ -1.6
BRCA2P51587 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.03□□□□□ -1.6
BRCA2P51587 AC116553.2-201ENST00000564203 463 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 AC020634.1-201ENST00000608701 549 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 MIR7151-201ENST00000617477 60 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 AC012314.7-201ENST00000619693 93 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
BRCA2P51587 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
BRCA2P51587 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRCA2P51587 AC104763.1-201ENST00000475274 360 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.03□□□□□ -1.6
BRCA2P51587 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.03□□□□□ -1.6
BRCA2P51587 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.61
BRCA2P51587 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
BRCA2P51587 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.02□□□□□ -1.61
BRCA2P51587 PCAT14-202ENST00000627127 3935 ntBASIC5.02□□□□□ -1.61
BRCA2P51587 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 MT-RNR1-201ENST00000389680 954 ntBASIC5.02□□□□□ -1.61
BRCA2P51587 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.02□□□□□ -1.61
BRCA2P51587 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.02□□□□□ -1.61
BRCA2P51587 AP001804.2-201ENST00000533932 910 ntBASIC5.02□□□□□ -1.61
BRCA2P51587 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 AC006453.5-201ENST00000636451 619 ntBASIC5.02□□□□□ -1.61
BRCA2P51587 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms