Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
SMARCA2P51531 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA2P51531 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SMARCA2P51531 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA2P51531 MIR659-201ENST00000384963 97 ntBASIC8.51□□□□□ -1.05
SMARCA2P51531 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SMARCA2P51531 RN7SL542P-201ENST00000467147 294 ntBASIC8.51□□□□□ -1.05
SMARCA2P51531 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA2P51531 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.51□□□□□ -1.05
SMARCA2P51531 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
SMARCA2P51531 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.5□□□□□ -1.05
SMARCA2P51531 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA2P51531 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.5□□□□□ -1.05
SMARCA2P51531 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SMARCA2P51531 SNX18P3-202ENST00000565670 1750 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 RNA5SP241-201ENST00000391326 114 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC8.5□□□□□ -1.05
SMARCA2P51531 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA2P51531 AC011477.5-201ENST00000586571 259 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 AC022916.3-201ENST00000592961 742 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.5□□□□□ -1.05
SMARCA2P51531 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.5□□□□□ -1.05
SMARCA2P51531 RNA5SP196-201ENST00000625967 102 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 U3.53-201ENST00000628922 216 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC8.5□□□□□ -1.05
SMARCA2P51531 AL137918.1-201ENST00000624542 1922 ntBASIC8.5□□□□□ -1.05
SMARCA2P51531 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC8.5□□□□□ -1.05
SMARCA2P51531 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA2P51531 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA2P51531 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA2P51531 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SMARCA2P51531 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SMARCA2P51531 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
SMARCA2P51531 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SMARCA2P51531 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.49□□□□□ -1.05
SMARCA2P51531 MTND2P40-201ENST00000436718 841 ntBASIC8.49□□□□□ -1.05
SMARCA2P51531 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.49□□□□□ -1.05
SMARCA2P51531 AC025164.1-201ENST00000496249 478 ntBASIC8.49□□□□□ -1.05
SMARCA2P51531 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC8.49□□□□□ -1.05
SMARCA2P51531 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.49□□□□□ -1.05
SMARCA2P51531 AC018695.5-201ENST00000605872 315 ntBASIC8.49□□□□□ -1.05
SMARCA2P51531 SNX18P1Y-201ENST00000616231 511 ntBASIC8.49□□□□□ -1.05
SMARCA2P51531 AC243960.7-201ENST00000623532 707 ntBASIC8.49□□□□□ -1.05
SMARCA2P51531 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
SMARCA2P51531 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.49□□□□□ -1.05
SMARCA2P51531 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SMARCA2P51531 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SMARCA2P51531 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SMARCA2P51531 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SMARCA2P51531 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SMARCA2P51531 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SMARCA2P51531 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
SMARCA2P51531 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SMARCA2P51531 UGT2B26P-201ENST00000508672 1613 ntBASIC8.49□□□□□ -1.05
SMARCA2P51531 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SMARCA2P51531 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.48□□□□□ -1.05
SMARCA2P51531 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC8.48□□□□□ -1.05
SMARCA2P51531 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
SMARCA2P51531 RPL7AP25-201ENST00000423357 805 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 NDUFA5P1-201ENST00000433858 341 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 RPS17P8-201ENST00000434525 335 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 RPS3AP54-201ENST00000435535 734 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.48□□□□□ -1.05
SMARCA2P51531 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC8.48□□□□□ -1.05
SMARCA2P51531 RN7SL197P-201ENST00000466981 299 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 RN7SL303P-201ENST00000469773 251 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC8.48□□□□□ -1.05
SMARCA2P51531 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 AC034229.2-201ENST00000566945 2508 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.48□□□□□ -1.05
SMARCA2P51531 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SMARCA2P51531 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SMARCA2P51531 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 AC007618.1-201ENST00000366455 732 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 RN7SL517P-201ENST00000462240 305 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 MIR2116-201ENST00000517221 80 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 IGKV2-23-201ENST00000518729 323 ntBASIC8.48□□□□□ -1.05
SMARCA2P51531 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.48□□□□□ -1.05
SMARCA2P51531 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.48□□□□□ -1.05
SMARCA2P51531 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SMARCA2P51531 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.47□□□□□ -1.05
SMARCA2P51531 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SMARCA2P51531 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.47□□□□□ -1.05
SMARCA2P51531 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SMARCA2P51531 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SMARCA2P51531 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
SMARCA2P51531 AL022722.2-201ENST00000402519 180 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms